Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AACH71_RS06695 Genome accession   NZ_AP029050
Coordinates   1307189..1307380 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus stercoris strain BST19     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1302189..1312380
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH71_RS06670 (BSB_13160) appD 1302528..1303514 (-) 987 WP_040083455.1 oligopeptide ABC transporter ATP-binding protein AppD -
  AACH71_RS06675 (BSB_13170) - 1303705..1304490 (-) 786 WP_136654677.1 DUF2268 domain-containing protein -
  AACH71_RS06680 (BSB_13180) fabF 1304565..1305806 (-) 1242 WP_040083457.1 beta-ketoacyl-ACP synthase II -
  AACH71_RS06685 (BSB_13190) fabH 1305829..1306767 (-) 939 WP_014663519.1 beta-ketoacyl-ACP synthase III -
  AACH71_RS06690 (BSB_13200) - 1306932..1307159 (+) 228 WP_080478200.1 hypothetical protein -
  AACH71_RS06695 (BSB_13210) comZ 1307189..1307380 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  AACH71_RS06700 (BSB_13220) med 1307395..1308348 (-) 954 WP_014663517.1 transcriptional regulator Med Regulator
  AACH71_RS06705 (BSB_13230) - 1308438..1308995 (-) 558 WP_014663516.1 hypothetical protein -
  AACH71_RS06710 (BSB_13240) - 1309077..1309811 (-) 735 WP_040083462.1 hypothetical protein -
  AACH71_RS06715 (BSB_13250) - 1310062..1310247 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  AACH71_RS06720 (BSB_13260) - 1310293..1310472 (-) 180 WP_003245356.1 YjzC family protein -
  AACH71_RS06725 (BSB_13270) argF 1310558..1311517 (-) 960 WP_040083464.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=108257 AACH71_RS06695 WP_003224559.1 1307189..1307380(-) (comZ) [Bacillus stercoris strain BST19]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=108257 AACH71_RS06695 WP_003224559.1 1307189..1307380(-) (comZ) [Bacillus stercoris strain BST19]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATACCTCCCTGAAGCGAAAGAACAGCTTGAAAAATC
AGGCATTGAGCTGTCAATGGAGGCCATACAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTACGAGCTTG
GCAAGTCTGATGCTAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment