Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   ACK2VN_RS07040 Genome accession   NZ_CP176690
Coordinates   1322831..1323625 (+) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus paranthracis strain GTVSS-022     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1317831..1328625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2VN_RS07025 (ACK2VN_07025) argR 1318671..1319120 (+) 450 WP_001032581.1 arginine repressor ArgR -
  ACK2VN_RS07030 (ACK2VN_07030) recN 1319387..1321126 (+) 1740 WP_000947749.1 DNA repair protein RecN Machinery gene
  ACK2VN_RS07035 (ACK2VN_07035) spoIVB 1321245..1322543 (+) 1299 WP_002028467.1 SpoIVB peptidase -
  ACK2VN_RS07040 (ACK2VN_07040) spo0A 1322831..1323625 (+) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  ACK2VN_RS07045 (ACK2VN_07045) - 1323879..1324025 (-) 147 WP_000803575.1 YycC family protein -
  ACK2VN_RS07050 (ACK2VN_07050) - 1324076..1324804 (+) 729 WP_000172554.1 glycerophosphodiester phosphodiesterase -
  ACK2VN_RS07055 (ACK2VN_07055) - 1324854..1325087 (-) 234 WP_001190187.1 DUF2627 domain-containing protein -
  ACK2VN_RS07060 (ACK2VN_07060) - 1325224..1327296 (+) 2073 WP_000811010.1 sigma-54 interaction domain-containing protein -
  ACK2VN_RS07065 (ACK2VN_07065) yqiS 1327492..1328391 (+) 900 WP_000763079.1 phosphate butyryltransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=1082372 ACK2VN_RS07040 WP_014297988.1 1322831..1323625(+) (spo0A) [Bacillus paranthracis strain GTVSS-022]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1082372 ACK2VN_RS07040 WP_014297988.1 1322831..1323625(+) (spo0A) [Bacillus paranthracis strain GTVSS-022]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
GGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822

Multiple sequence alignment