Detailed information NTG1082087

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACK2V6_RS01240
• Genome accession: NZ_CP176657
• Coordinates: 264571..265578 (-)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain GTVSS-032
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 259571..270578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2V6_RS01210 (ACK2V6_01210)	zapB	259740..259982 (+)	243	WP_005481417.1	cell division protein ZapB	-
ACK2V6_RS01215 (ACK2V6_01215)	rraA	260087..260599 (-)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
ACK2V6_RS01220 (ACK2V6_01220)	-	260676..261593 (-)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACK2V6_RS01225 (ACK2V6_01225)	hslU	261778..263109 (-)	1332	WP_005457198.1	HslU--HslV peptidase ATPase subunit	-
ACK2V6_RS01230 (ACK2V6_01230)	hslV	263133..263684 (-)	552	WP_005455873.1	ATP-dependent protease subunit HslV	-
ACK2V6_RS01235 (ACK2V6_01235)	ftsN	263849..264394 (-)	546	WP_005481405.1	cell division protein FtsN	-
ACK2V6_RS01240 (ACK2V6_01240)	cytR	264571..265578 (-)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
ACK2V6_RS01245 (ACK2V6_01245)	priA	265911..268115 (-)	2205	WP_005481427.1	primosomal protein N'	-
ACK2V6_RS01250 (ACK2V6_01250)	rpmE	268410..268631 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
ACK2V6_RS01255 (ACK2V6_01255)	rpsJ	269089..269400 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
ACK2V6_RS01260 (ACK2V6_01260)	rplC	269415..270044 (+)	630	WP_005456132.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=1082087 ACK2V6_RS01240 WP_005481416.1 264571..265578(-) (cytR) [Vibrio parahaemolyticus strain GTVSS-032]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=1082087 ACK2V6_RS01240 WP_005481416.1 264571..265578(-) (cytR) [Vibrio parahaemolyticus strain GTVSS-032]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGTACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GTGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGCGACACCATGGCAATCGGCGCAATCCAAGAAGCCAAACGACTCGGTCTGCGCGTTCCGCAAGATTT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTACTTAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904