Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ACK2I7_RS00815 Genome accession   NZ_CP176632
Coordinates   160962..162008 (+) Length   348 a.a.
NCBI ID   WP_057489573.1    Uniprot ID   A0AAP6ENR0
Organism   Streptococcus anginosus strain SFAD 40     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 155962..167008
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2I7_RS00785 tsaE 157335..157775 (+) 441 WP_057489569.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACK2I7_RS00790 - 157768..158289 (+) 522 WP_057489570.1 GNAT family N-acetyltransferase -
  ACK2I7_RS00795 brpA 158296..159411 (+) 1116 WP_057489571.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACK2I7_RS00800 - 159458..159745 (-) 288 WP_057489572.1 hypothetical protein -
  ACK2I7_RS00805 - 159755..160165 (-) 411 WP_003025977.1 HIT family protein -
  ACK2I7_RS00810 pptA 160234..160965 (+) 732 WP_049517074.1 ABC transporter ATP-binding protein Regulator
  ACK2I7_RS00815 pptB 160962..162008 (+) 1047 WP_057489573.1 ABC transporter permease Regulator
  ACK2I7_RS00820 ccrZ 162059..162856 (+) 798 WP_003025972.1 cell cycle regulator CcrZ -
  ACK2I7_RS00825 trmB 162853..163488 (+) 636 WP_021001286.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACK2I7_RS00830 - 164105..164794 (+) 690 WP_003025968.1 VIT family protein -
  ACK2I7_RS00835 rimP 165042..165530 (+) 489 WP_003025965.1 ribosome maturation factor RimP -
  ACK2I7_RS00840 nusA 165579..166772 (+) 1194 WP_003025963.1 transcription termination factor NusA -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 40917.19 Da        Isoelectric Point: 10.3649

>NTDB_id=1081690 ACK2I7_RS00815 WP_057489573.1 160962..162008(+) (pptB) [Streptococcus anginosus strain SFAD 40]
MRELFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFTGFLAVQYSQLLRNLPSNHLPIILALAVLLFLLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWALLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNIYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYNAFDYQYLTFLFPLETGLKLKGVKQVIILIGYSVLFVETIMALLFFQD
RVALLFMIGITLLLYFIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=1081690 ACK2I7_RS00815 WP_057489573.1 160962..162008(+) (pptB) [Streptococcus anginosus strain SFAD 40]
ATGAGAGAACTGTTTCAAAAGCGCAAACAAGTATTTCGCAATCAATGTTTGAAGTATTCGCGCTATGTTTTTAACGACCA
TTTTGTCCTCTTTTTATTAGTTTTTACTGGCTTTTTAGCTGTTCAATACAGTCAGTTGTTGCGAAATTTACCTTCAAATC
ACCTGCCAATCATTCTTGCTTTAGCAGTTCTTTTGTTCTTATTATTGCCTTTGGGACGAATCGCGACTTATATGGAAAAA
CCAGATAGTTTATTTTTGTTAGTCAAAGAGGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGATT
ATGGGCCTTGCTTCAAACCGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGCTATCTCATTGCTTATGAAGAAAGACGTAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACCAATGT
CAAAGGAATTTCTAATAGTGTGAAACGCCGTGCGTATCTTGATGGTTTGACAAATATTCTACCAAAAAGACAGTCAACTA
CTTGGCAAAATATATATTTGCGTTCTTATTTACGAAATGGTGATTTTCTGGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGTTTTATCAGTCAATCATGGATTGCGGCTATTTTCGTGGCTTTGTTGAATTATCTCTTGCTATTTCA
GTTGACAGCCTTGTACAATGCTTTTGATTATCAATATTTGACGTTCTTATTTCCTTTGGAAACTGGATTGAAATTAAAAG
GAGTGAAACAAGTGATTATTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATAATGGCTTTGTTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATTGGAATTACATTGCTACTTTATTTCATCTATTTACCATTTAAATTAAGAAGTTTGGT
TGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.276

100

0.483

  pptB Streptococcus salivarius strain HSISS4

46.839

100

0.468


Multiple sequence alignment