Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   ACKZ7S_RS04910 Genome accession   NZ_CP176565
Coordinates   987352..988338 (+) Length   328 a.a.
NCBI ID   WP_000959297.1    Uniprot ID   -
Organism   Staphylococcus aureus strain V0353     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 982352..993338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKZ7S_RS04885 (ACKZ7S_04885) opp4B 982565..983527 (+) 963 WP_000593417.1 oligopeptide ABC transporter permease -
  ACKZ7S_RS04890 (ACKZ7S_04890) opp4C 983539..984420 (+) 882 WP_162636852.1 oligopeptide ABC transporter permease -
  ACKZ7S_RS04895 (ACKZ7S_04895) trpS 984462..985451 (-) 990 WP_162636850.1 tryptophan--tRNA ligase -
  ACKZ7S_RS04900 (ACKZ7S_04900) spxA 985746..986141 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  ACKZ7S_RS04905 (ACKZ7S_04905) mecA 986512..987231 (+) 720 WP_001217737.1 adaptor protein MecA -
  ACKZ7S_RS04910 (ACKZ7S_04910) coiA 987352..988338 (+) 987 WP_000959297.1 competence protein CoiA Machinery gene
  ACKZ7S_RS04915 (ACKZ7S_04915) pepF 988386..990194 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  ACKZ7S_RS04920 (ACKZ7S_04920) yjbH 990654..991460 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  ACKZ7S_RS04925 (ACKZ7S_04925) - 991483..991848 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  ACKZ7S_RS04930 (ACKZ7S_04930) - 991952..992545 (-) 594 WP_162636591.1 CYTH domain-containing protein -
  ACKZ7S_RS04935 (ACKZ7S_04935) - 992731..993078 (+) 348 WP_001242107.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38616.15 Da        Isoelectric Point: 9.6530

>NTDB_id=1080895 ACKZ7S_RS04910 WP_000959297.1 987352..988338(+) (coiA) [Staphylococcus aureus strain V0353]
MLVALNGEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1080895 ACKZ7S_RS04910 WP_000959297.1 987352..988338(+) (coiA) [Staphylococcus aureus strain V0353]
ATGTTAGTAGCTTTAAATGGAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(10-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.646

100

0.966
  coiA Staphylococcus aureus MW2

96.646

100

0.966

Multiple sequence alignment