Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   ACKZ7T_RS05110 Genome accession   NZ_CP176564
Coordinates   1021060..1022046 (+) Length   328 a.a.
NCBI ID   WP_409481229.1    Uniprot ID   -
Organism   Staphylococcus aureus strain V0641     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1016060..1027046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKZ7T_RS05090 (ACKZ7T_05090) - 1016427..1018049 (+) 1623 WP_409481228.1 peptide ABC transporter substrate-binding protein -
  ACKZ7T_RS05095 (ACKZ7T_05095) trpS 1018168..1019157 (-) 990 WP_000448933.1 tryptophan--tRNA ligase -
  ACKZ7T_RS05100 (ACKZ7T_05100) spxA 1019452..1019847 (+) 396 WP_072491461.1 transcriptional regulator SpxA -
  ACKZ7T_RS05105 (ACKZ7T_05105) mecA 1020220..1020939 (+) 720 WP_001217728.1 adaptor protein MecA -
  ACKZ7T_RS05110 (ACKZ7T_05110) coiA 1021060..1022046 (+) 987 WP_409481229.1 competence protein CoiA Machinery gene
  ACKZ7T_RS05115 (ACKZ7T_05115) pepF 1022094..1023902 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  ACKZ7T_RS05120 (ACKZ7T_05120) - 1024483..1025802 (+) 1320 WP_409481230.1 ISL3-like element IS1181 family transposase -
  ACKZ7T_RS05125 (ACKZ7T_05125) yjbH 1025882..1026688 (-) 807 WP_000896697.1 protease adaptor protein YjbH -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38773.28 Da        Isoelectric Point: 9.5869

>NTDB_id=1080855 ACKZ7T_RS05110 WP_409481229.1 1021060..1022046(+) (coiA) [Staphylococcus aureus strain V0641]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLENKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1080855 ACKZ7T_RS05110 WP_409481229.1 1021060..1022046(+) (coiA) [Staphylococcus aureus strain V0641]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAATAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

97.256

100

0.973
  coiA Staphylococcus aureus MW2

97.256

100

0.973

Multiple sequence alignment