Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACK2WG_RS02145 Genome accession   NZ_CP176536
Coordinates   433777..434727 (+) Length   316 a.a.
NCBI ID   WP_061186190.1    Uniprot ID   -
Organism   Bacillus spizizenii strain 29-4     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 428777..439727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2WG_RS02120 (ACK2WG_02120) yclK 428831..430252 (+) 1422 WP_409509433.1 two-component system sensor histidine kinase YclK -
  ACK2WG_RS02125 (ACK2WG_02125) rapC 430414..431562 (+) 1149 WP_014112649.1 response regulator aspartate phosphatase RapC Regulator
  ACK2WG_RS02130 (ACK2WG_02130) phrC 431546..431668 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  ACK2WG_RS02135 (ACK2WG_02135) - 431767..431874 (-) 108 WP_071578333.1 YjcZ family sporulation protein -
  ACK2WG_RS02140 (ACK2WG_02140) - 432027..433391 (-) 1365 WP_088680298.1 aspartate kinase -
  ACK2WG_RS02145 (ACK2WG_02145) ceuB 433777..434727 (+) 951 WP_061186190.1 petrobactin ABC transporter permease YclN Machinery gene
  ACK2WG_RS02150 (ACK2WG_02150) yclO 434720..435667 (+) 948 WP_014112652.1 petrobactin ABC transporter permease YclO -
  ACK2WG_RS02155 (ACK2WG_02155) yclP 435661..436419 (+) 759 WP_014112653.1 petrobactin ABC transporter ATP-binding protein YclP -
  ACK2WG_RS02160 (ACK2WG_02160) yclQ 436441..437397 (+) 957 WP_014112654.1 petrobactin ABC transporter substrate-binding protein YclQ -
  ACK2WG_RS02165 (ACK2WG_02165) - 437443..438861 (-) 1419 WP_014112655.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34916.33 Da        Isoelectric Point: 9.9364

>NTDB_id=1080752 ACK2WG_RS02145 WP_061186190.1 433777..434727(+) (ceuB) [Bacillus spizizenii strain 29-4]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1080752 ACK2WG_RS02145 WP_061186190.1 433777..434727(+) (ceuB) [Bacillus spizizenii strain 29-4]
ATGAAGTTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCCTTGCTGCTGTTCACATCCGCCAGTCCTTTAATGAAAATGCT
GGTCGCGTTCGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTCCAAGGAGACTTCTCTTTAGTGGTAAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTTATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGAGAAAGTTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
TTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTCTCGATTTACAGAGGAGACAATCTGAAGAACAGCCTGCCGCACAC
GGCGCTATTGGGAGCGGTTTTTGTGCTCTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTACGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment