Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ACK2WG_RS01945 | Genome accession | NZ_CP176536 |
| Coordinates | 372568..373017 (-) | Length | 149 a.a. |
| NCBI ID | WP_409509421.1 | Uniprot ID | - |
| Organism | Bacillus spizizenii strain 29-4 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 367568..378017
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK2WG_RS01905 (ACK2WG_01905) | - | 367925..368104 (+) | 180 | Protein_343 | hypothetical protein | - |
| ACK2WG_RS01910 (ACK2WG_01910) | - | 368101..368556 (+) | 456 | WP_014112607.1 | RDD family protein | - |
| ACK2WG_RS01915 (ACK2WG_01915) | - | 368639..368971 (+) | 333 | WP_409509420.1 | YckD family protein | - |
| ACK2WG_RS01920 (ACK2WG_01920) | - | 369103..369528 (+) | 426 | WP_079288199.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| ACK2WG_RS01925 (ACK2WG_01925) | - | 369516..369857 (+) | 342 | WP_014112610.1 | DUF3147 family protein | - |
| ACK2WG_RS01930 (ACK2WG_01930) | - | 369877..370605 (+) | 729 | WP_014112611.1 | AAA family ATPase | - |
| ACK2WG_RS01935 (ACK2WG_01935) | bglC | 370678..372111 (+) | 1434 | WP_242734798.1 | 6-phospho-beta-glucosidase | - |
| ACK2WG_RS01940 (ACK2WG_01940) | nin/comJ | 372147..372545 (-) | 399 | WP_014112613.1 | DNA-entry nuclease inhibitor | Regulator |
| ACK2WG_RS01945 (ACK2WG_01945) | nucA/comI | 372568..373017 (-) | 450 | WP_409509421.1 | DNA-entry nuclease | Machinery gene |
| ACK2WG_RS01950 (ACK2WG_01950) | tlpC | 373191..374915 (-) | 1725 | WP_409509422.1 | methyl-accepting chemotaxis protein TlpC | - |
| ACK2WG_RS01955 (ACK2WG_01955) | hxlB | 375027..375584 (-) | 558 | WP_072182406.1 | 6-phospho-3-hexuloisomerase | - |
| ACK2WG_RS01960 (ACK2WG_01960) | hxlA | 375589..376221 (-) | 633 | WP_014112617.1 | 3-hexulose-6-phosphate synthase | - |
| ACK2WG_RS01965 (ACK2WG_01965) | hxlR | 376452..376814 (+) | 363 | WP_014112618.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16405.41 Da Isoelectric Point: 4.4321
>NTDB_id=1080749 ACK2WG_RS01945 WP_409509421.1 372568..373017(-) (nucA/comI) [Bacillus spizizenii strain 29-4]
MNITMDIIKTILLVIVVIAAAAVALIKGDFFSADQKTSQTKEYDETIALPSDRYPETAKHIKDAINEGHSDVCTIDRDGA
EERREQSLKDVPPKTGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
MNITMDIIKTILLVIVVIAAAAVALIKGDFFSADQKTSQTKEYDETIALPSDRYPETAKHIKDAINEGHSDVCTIDRDGA
EERREQSLKDVPPKTGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=1080749 ACK2WG_RS01945 WP_409509421.1 372568..373017(-) (nucA/comI) [Bacillus spizizenii strain 29-4]
GTGAACATCACGATGGACATCATAAAAACAATACTTCTCGTCATCGTCGTCATAGCAGCTGCAGCTGTCGCCCTGATAAA
GGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGACGAAACGATCGCCCTCCCTTCTGACCGTT
ATCCCGAAACGGCCAAACATATTAAGGATGCGATAAATGAGGGGCACTCAGATGTGTGCACCATCGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAAGACGTACCGCCAAAAACGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCTGCTGACAACCGCGGTGCAGGCTCTTGGGTTGGGCATC
AGCTTACCGATTATCCAGACGGCACAAAGGTTTTATTCACGATTCAGTAA
GTGAACATCACGATGGACATCATAAAAACAATACTTCTCGTCATCGTCGTCATAGCAGCTGCAGCTGTCGCCCTGATAAA
GGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGACGAAACGATCGCCCTCCCTTCTGACCGTT
ATCCCGAAACGGCCAAACATATTAAGGATGCGATAAATGAGGGGCACTCAGATGTGTGCACCATCGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAAGACGTACCGCCAAAAACGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCTGCTGACAACCGCGGTGCAGGCTCTTGGGTTGGGCATC
AGCTTACCGATTATCCAGACGGCACAAAGGTTTTATTCACGATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
93.96 |
100 |
0.94 |