Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   ACK2WG_RS01940 Genome accession   NZ_CP176536
Coordinates   372147..372545 (-) Length   132 a.a.
NCBI ID   WP_014112613.1    Uniprot ID   G4NQU8
Organism   Bacillus spizizenii strain 29-4     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 367147..377545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2WG_RS01905 (ACK2WG_01905) - 367925..368104 (+) 180 Protein_343 hypothetical protein -
  ACK2WG_RS01910 (ACK2WG_01910) - 368101..368556 (+) 456 WP_014112607.1 RDD family protein -
  ACK2WG_RS01915 (ACK2WG_01915) - 368639..368971 (+) 333 WP_409509420.1 YckD family protein -
  ACK2WG_RS01920 (ACK2WG_01920) - 369103..369528 (+) 426 WP_079288199.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACK2WG_RS01925 (ACK2WG_01925) - 369516..369857 (+) 342 WP_014112610.1 DUF3147 family protein -
  ACK2WG_RS01930 (ACK2WG_01930) - 369877..370605 (+) 729 WP_014112611.1 AAA family ATPase -
  ACK2WG_RS01935 (ACK2WG_01935) bglC 370678..372111 (+) 1434 WP_242734798.1 6-phospho-beta-glucosidase -
  ACK2WG_RS01940 (ACK2WG_01940) nin/comJ 372147..372545 (-) 399 WP_014112613.1 DNA-entry nuclease inhibitor Regulator
  ACK2WG_RS01945 (ACK2WG_01945) nucA/comI 372568..373017 (-) 450 WP_409509421.1 DNA-entry nuclease Machinery gene
  ACK2WG_RS01950 (ACK2WG_01950) tlpC 373191..374915 (-) 1725 WP_409509422.1 methyl-accepting chemotaxis protein TlpC -
  ACK2WG_RS01955 (ACK2WG_01955) hxlB 375027..375584 (-) 558 WP_072182406.1 6-phospho-3-hexuloisomerase -
  ACK2WG_RS01960 (ACK2WG_01960) hxlA 375589..376221 (-) 633 WP_014112617.1 3-hexulose-6-phosphate synthase -
  ACK2WG_RS01965 (ACK2WG_01965) hxlR 376452..376814 (+) 363 WP_014112618.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14922.90 Da        Isoelectric Point: 4.6034

>NTDB_id=1080748 ACK2WG_RS01940 WP_014112613.1 372147..372545(-) (nin/comJ) [Bacillus spizizenii strain 29-4]
MIKSWKPQELSISYHQFTVFQKDSAPPVMDWTDEAIEKGFAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIEIESIMSKRLSFDLPKGEYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1080748 ACK2WG_RS01940 WP_014112613.1 372147..372545(-) (nin/comJ) [Bacillus spizizenii strain 29-4]
TTGATCAAGTCATGGAAACCTCAAGAACTGTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTGCACCTCC
TGTTATGGATTGGACTGACGAAGCGATCGAAAAAGGATTCGCGGCGGCGGACGGAGCGATTTCGTTTGAGGCACAGAGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACTGTAAACTCCTACGAAAAGAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTGAAATTGAAAGCATTATGTCTAAAAGGCTGTCCTTTGATCTTCCTAAAGGAGAATATCA
ATTGACATGCTGGACTGTGCCGGCTGAGATGTCAGATCTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NQU8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

96.212

100

0.962


Multiple sequence alignment