Detailed information NTG0108069

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: AACJ33_RS10890
• Genome accession: NZ_AP029014
• Coordinates: 2351667..2354204 (-)
• Length: 845 a.a.
• NCBI ID: WP_118883414.1
• Uniprot ID: -
• Organism: Ralstonia syzygii subsp. indonesiensis strain MAFF 211271
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2346667..2359204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACJ33_RS10870 (MAFF211271_21100)	-	2347175..2348089 (-)	915	WP_075464832.1	peptidase	-
AACJ33_RS10875 (MAFF211271_21110)	-	2348173..2349009 (-)	837	WP_075464834.1	transglutaminase N-terminal domain-containing protein	-
AACJ33_RS10880 (MAFF211271_21120)	-	2349067..2350017 (-)	951	WP_118883412.1	alpha-E domain-containing protein	-
AACJ33_RS10885 (MAFF211271_21130)	-	2350080..2351561 (-)	1482	WP_075464838.1	circularly permuted type 2 ATP-grasp protein	-
AACJ33_RS10890 (MAFF211271_21140)	comA	2351667..2354204 (-)	2538	WP_118883414.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AACJ33_RS10895 (MAFF211271_21150)	-	2354214..2355029 (-)	816	WP_013212918.1	TatD family hydrolase	-
AACJ33_RS10900 (MAFF211271_21160)	lolD	2355058..2355792 (-)	735	WP_118883415.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
AACJ33_RS10905 (MAFF211271_21170)	-	2355785..2357035 (-)	1251	WP_075464844.1	lipoprotein-releasing ABC transporter permease subunit	-
AACJ33_RS10910 (MAFF211271_21180)	-	2357108..2358187 (+)	1080	WP_118883416.1	hypothetical protein	-

Sequence

Protein

• Length: 845 a.a.
• Molecular weight: 90726.52 Da
• Isoelectric Point: 10.1626

>NTDB_id=108069 AACJ33_RS10890 WP_118883414.1 2351667..2354204(-) (comA) [Ralstonia syzygii subsp. indonesiensis strain MAFF 211271]
MRALLIGFVAGCMVLQTQPSLVPVWQPGLLGLACLLAMAVLRRGGRLPRLVPVMAVLAAACVGFGWSDWRAQQRLSVVLA
PEWEGKAIRATGVVAELPQVTEDATRFLFHIESSDAGGAVPPRVRLSWYGKRSWNERRREAGAATDRRAGIPDLQPGQRW
QLTLRLKRPHSLMNPGGFDGEYAMLADTIRAAGYVHTGKRARNAPMGEAGAGFGLHVERWRAAVRRHILAALPDARYAPV
MVALVVGDQSGIAQADWERFRRTGISHLVSISGLHITMIAGLFAALWMALWRRSFGLARWLRTPLPLRMPAQRAGAIAAM
TAALAYCLLAGMGVPAQRTLLMLATVAVARLTDRSVPASLSLCWAAAAVALVDPWAVMSAGFWLSFGAVAVIFLAARIVA
ADARDDDRRPAWPIRAWRGLRGAARIQLAVTFGLLPLTLLLFQQVSVVSAVANALAIPVVSFVTTPLALMGAALPGPWSP
PVLAWAEASFGWLVSWLDGLAMPGWSVWVAPVAPAWAWMPALVGVLLLLVPGGCRAWAWRAQGAILLLPMLLARAPVPPP
GEFRMVAFDIGQGAATLVETAGHRLLFDTGPGHGDLADAADRVIVPYLRGHGVQAIDTLVVSHEDSDHAGGTETVMAEVP
VRTMLASWPPGHRLDEQARAHGIDTAGCVAGQRWVWDGVAFEILHPVQAPPDRAPVSSNARSCVLRIAGARYAAMLAGDI
GSAQEMALIAAEAPERLMADILLVPHHGSKTSSSGAFLDAVSPQVAIFQVGYRNRYGHPHPQVWQRYGARDIERLRTDAA
GAVVIETRGDALDVRTARSMRPRYWSSALEVAALADATEPTDAQP

Nucleotide

• Length: 2538 bp

>NTDB_id=108069 AACJ33_RS10890 WP_118883414.1 2351667..2354204(-) (comA) [Ralstonia syzygii subsp. indonesiensis strain MAFF 211271]
ATGCGCGCCCTGCTGATCGGCTTTGTCGCGGGGTGCATGGTGCTGCAGACGCAGCCGTCGCTGGTGCCGGTGTGGCAGCC
GGGGCTGCTCGGGCTCGCTTGTCTGCTGGCGATGGCGGTGCTGCGGCGCGGGGGGCGGTTGCCGAGGCTTGTTCCCGTGA
TGGCCGTGCTGGCGGCGGCTTGCGTCGGCTTCGGCTGGAGTGACTGGCGCGCGCAGCAGCGGCTGTCCGTGGTGCTGGCG
CCCGAATGGGAGGGCAAGGCCATCCGCGCAACGGGCGTTGTGGCCGAGCTGCCCCAGGTCACCGAGGACGCCACGCGTTT
CCTGTTTCACATCGAATCCAGCGACGCGGGCGGCGCCGTGCCGCCGCGCGTGCGCCTGTCGTGGTATGGCAAGCGCAGCT
GGAACGAGCGGCGGCGGGAGGCCGGGGCGGCCACCGATCGGCGCGCCGGCATCCCCGACCTGCAGCCCGGCCAGCGCTGG
CAGCTGACGCTGCGGCTCAAGCGGCCGCACAGCCTGATGAACCCGGGCGGCTTCGACGGCGAATACGCAATGCTCGCCGA
CACGATCCGCGCCGCGGGCTACGTGCACACCGGCAAACGCGCGCGCAATGCGCCGATGGGCGAAGCCGGCGCCGGTTTCG
GTCTCCATGTCGAGCGCTGGCGTGCCGCGGTGCGGCGGCACATCCTCGCCGCATTGCCCGATGCGCGCTATGCGCCCGTG
ATGGTCGCCCTGGTGGTGGGCGACCAGAGCGGCATCGCCCAGGCAGACTGGGAGCGCTTCCGCCGCACCGGCATCAGCCA
TCTCGTCAGCATTTCCGGTCTGCACATCACGATGATCGCCGGGCTGTTCGCCGCGCTCTGGATGGCGCTGTGGCGGCGCT
CGTTCGGTCTGGCCCGCTGGCTGCGCACGCCGCTGCCGCTGCGCATGCCGGCCCAGCGCGCCGGCGCCATCGCCGCGATG
ACGGCGGCGCTCGCCTATTGCCTGCTGGCGGGGATGGGCGTGCCGGCGCAGCGCACGCTGCTGATGCTCGCGACCGTCGC
CGTGGCGCGGCTGACCGATCGCAGCGTGCCGGCCAGCCTGTCGCTGTGCTGGGCCGCGGCCGCGGTGGCGCTGGTGGACC
CGTGGGCGGTCATGTCGGCGGGATTCTGGCTGTCGTTCGGCGCGGTGGCGGTCATCTTCCTGGCCGCGCGGATCGTTGCC
GCCGATGCGCGGGACGATGACCGTCGGCCCGCCTGGCCGATACGCGCCTGGCGCGGTCTGCGCGGCGCCGCGCGCATCCA
GTTGGCCGTGACGTTCGGTCTGCTGCCGTTGACGCTGCTGCTGTTCCAGCAGGTCTCGGTGGTGTCGGCCGTGGCCAACG
CGCTCGCGATCCCGGTGGTCAGCTTTGTCACGACGCCGCTGGCGTTGATGGGCGCGGCGCTGCCCGGGCCGTGGTCGCCG
CCGGTGCTGGCGTGGGCCGAGGCCAGCTTCGGGTGGCTCGTGTCGTGGCTGGATGGGCTGGCGATGCCGGGCTGGTCCGT
GTGGGTGGCGCCCGTCGCGCCCGCCTGGGCGTGGATGCCGGCCCTCGTCGGTGTGCTGTTGCTGCTCGTGCCGGGTGGTT
GTCGCGCCTGGGCCTGGCGGGCGCAGGGCGCGATCCTGTTGCTGCCGATGCTGCTGGCGCGCGCACCGGTGCCGCCGCCG
GGCGAGTTCCGGATGGTGGCATTCGACATCGGCCAGGGCGCCGCCACGCTGGTCGAGACGGCCGGCCACCGGCTGCTGTT
CGACACCGGCCCCGGCCATGGCGACCTTGCCGATGCCGCCGACCGCGTGATCGTCCCGTATCTGCGCGGACATGGCGTAC
AGGCCATCGATACGCTGGTGGTCAGCCACGAGGACAGCGACCACGCCGGCGGCACCGAAACGGTGATGGCCGAGGTGCCG
GTGCGCACCATGCTGGCGTCCTGGCCGCCCGGCCACCGGCTGGACGAGCAGGCCCGCGCGCACGGCATCGATACCGCTGG
CTGCGTGGCCGGACAGCGTTGGGTGTGGGACGGTGTCGCCTTCGAAATCCTGCATCCGGTGCAGGCGCCCCCCGATAGGG
CGCCCGTGTCCAGCAACGCCCGCAGCTGCGTGCTGCGCATCGCCGGCGCACGCTACGCCGCCATGCTGGCCGGCGACATC
GGCAGCGCCCAGGAAATGGCGCTGATCGCCGCCGAAGCGCCGGAGCGGCTCATGGCAGACATCTTGCTTGTGCCCCACCA
CGGCAGCAAGACGAGCTCCAGCGGCGCGTTTTTGGACGCGGTCTCTCCGCAGGTGGCGATTTTCCAGGTCGGCTACCGCA
ACCGGTACGGTCATCCGCATCCGCAGGTCTGGCAGCGCTACGGCGCGCGCGACATCGAGCGGCTGCGCACCGATGCAGCC
GGGGCCGTCGTCATCGAGACGCGCGGCGATGCGCTGGATGTGCGGACGGCGCGGTCGATGCGGCCGCGCTACTGGTCCTC
GGCGCTGGAGGTCGCAGCCCTGGCAGACGCCACGGAGCCCACGGACGCGCAGCCGTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-197)

• Beta-lactamase superfamily domain (Lactamase_B_2) (583-743)

• Competence protein (Competence) (244-530)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Ralstonia pseudosolanacearum GMI1000	89.965	100	0.902