Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACKPXQ_RS05690 Genome accession   NZ_CP176038
Coordinates   1108520..1108711 (+) Length   63 a.a.
NCBI ID   WP_182072551.1    Uniprot ID   -
Organism   Bacillus velezensis strain A4     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1103520..1113711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKPXQ_RS05660 (ACKPXQ_05660) argF 1104372..1105343 (+) 972 WP_022553565.1 ornithine carbamoyltransferase -
  ACKPXQ_RS05665 (ACKPXQ_05665) - 1105419..1105598 (+) 180 WP_003155070.1 YjzC family protein -
  ACKPXQ_RS05670 (ACKPXQ_05670) - 1105634..1105819 (-) 186 WP_007409129.1 YjzD family protein -
  ACKPXQ_RS05675 (ACKPXQ_05675) - 1106080..1106814 (+) 735 WP_115940909.1 hypothetical protein -
  ACKPXQ_RS05680 (ACKPXQ_05680) - 1106897..1107463 (+) 567 WP_115940908.1 hypothetical protein -
  ACKPXQ_RS05685 (ACKPXQ_05685) med 1107554..1108507 (+) 954 WP_072177123.1 BMP family ABC transporter substrate-binding protein Regulator
  ACKPXQ_RS05690 (ACKPXQ_05690) comZ 1108520..1108711 (+) 192 WP_182072551.1 ComZ family protein Regulator
  ACKPXQ_RS05695 (ACKPXQ_05695) - 1108740..1108958 (-) 219 WP_007610579.1 hypothetical protein -
  ACKPXQ_RS05700 (ACKPXQ_05700) - 1109126..1110064 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ACKPXQ_RS05705 (ACKPXQ_05705) fabF 1110087..1111325 (+) 1239 WP_025649581.1 beta-ketoacyl-ACP synthase II -
  ACKPXQ_RS05710 (ACKPXQ_05710) - 1111409..1112194 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  ACKPXQ_RS05715 (ACKPXQ_05715) - 1112368..1113354 (+) 987 WP_025284553.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7185.30 Da        Isoelectric Point: 4.2259

>NTDB_id=1079498 ACKPXQ_RS05690 WP_182072551.1 1108520..1108711(+) (comZ) [Bacillus velezensis strain A4]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFLDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1079498 ACKPXQ_RS05690 WP_182072551.1 1108520..1108711(+) (comZ) [Bacillus velezensis strain A4]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCAATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTTTGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

84.483

92.063

0.778

Multiple sequence alignment