Detailed information NTG1079497

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACKPXQ_RS05685
• Genome accession: NZ_CP176038
• Coordinates: 1107554..1108507 (+)
• Length: 317 a.a.
• NCBI ID: WP_072177123.1
• Uniprot ID: A0AAP5QP93
• Organism: Bacillus velezensis strain A4
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1102554..1113507

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKPXQ_RS05660 (ACKPXQ_05660)	argF	1104372..1105343 (+)	972	WP_022553565.1	ornithine carbamoyltransferase	-
ACKPXQ_RS05665 (ACKPXQ_05665)	-	1105419..1105598 (+)	180	WP_003155070.1	YjzC family protein	-
ACKPXQ_RS05670 (ACKPXQ_05670)	-	1105634..1105819 (-)	186	WP_007409129.1	YjzD family protein	-
ACKPXQ_RS05675 (ACKPXQ_05675)	-	1106080..1106814 (+)	735	WP_115940909.1	hypothetical protein	-
ACKPXQ_RS05680 (ACKPXQ_05680)	-	1106897..1107463 (+)	567	WP_115940908.1	hypothetical protein	-
ACKPXQ_RS05685 (ACKPXQ_05685)	med	1107554..1108507 (+)	954	WP_072177123.1	BMP family ABC transporter substrate-binding protein	Regulator
ACKPXQ_RS05690 (ACKPXQ_05690)	comZ	1108520..1108711 (+)	192	WP_182072551.1	ComZ family protein	Regulator
ACKPXQ_RS05695 (ACKPXQ_05695)	-	1108740..1108958 (-)	219	WP_007610579.1	hypothetical protein	-
ACKPXQ_RS05700 (ACKPXQ_05700)	-	1109126..1110064 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
ACKPXQ_RS05705 (ACKPXQ_05705)	fabF	1110087..1111325 (+)	1239	WP_025649581.1	beta-ketoacyl-ACP synthase II	-
ACKPXQ_RS05710 (ACKPXQ_05710)	-	1111409..1112194 (+)	786	WP_012117278.1	DUF2268 domain-containing protein	-
ACKPXQ_RS05715 (ACKPXQ_05715)	-	1112368..1113354 (+)	987	WP_025284553.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35330.94 Da
• Isoelectric Point: 4.6686

>NTDB_id=1079497 ACKPXQ_RS05685 WP_072177123.1 1107554..1108507(+) (med) [Bacillus velezensis strain A4]
MITRLVMTFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1079497 ACKPXQ_RS05685 WP_072177123.1 1107554..1108507(+) (med) [Bacillus velezensis strain A4]
TTGATCACCAGGCTTGTCATGACCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATTTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTGATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTAGGTGTCATCGCCTCCTTTCTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.233	100	0.782