Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACJ229_RS11545 | Genome accession | NZ_CP175656 |
| Coordinates | 2274980..2275360 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain UMB001 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2269980..2280360
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJ229_RS11515 (ACJ229_11525) | kdsB | 2270883..2271644 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACJ229_RS11520 (ACJ229_11530) | - | 2271656..2272636 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACJ229_RS11525 (ACJ229_11535) | - | 2272648..2272989 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACJ229_RS11530 (ACJ229_11540) | - | 2273007..2273780 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACJ229_RS11535 (ACJ229_11545) | - | 2273818..2274426 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACJ229_RS11540 (ACJ229_11550) | - | 2274436..2274990 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACJ229_RS11545 (ACJ229_11555) | xcpV | 2274980..2275360 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACJ229_RS11550 (ACJ229_11560) | xcpW | 2275360..2276061 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACJ229_RS11555 (ACJ229_11565) | gspK | 2276061..2277020 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACJ229_RS11560 (ACJ229_11570) | - | 2277251..2277847 (+) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| ACJ229_RS11565 (ACJ229_11575) | ung | 2277898..2278611 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACJ229_RS11570 (ACJ229_11580) | - | 2278608..2279732 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACJ229_RS11575 (ACJ229_11585) | tadA | 2279739..2280242 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1078555 ACJ229_RS11545 WP_000836911.1 2274980..2275360(+) (xcpV) [Acinetobacter baumannii strain UMB001]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1078555 ACJ229_RS11545 WP_000836911.1 2274980..2275360(+) (xcpV) [Acinetobacter baumannii strain UMB001]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |