Detailed information NTG1078556

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACJ229_RS11550
• Genome accession: NZ_CP175656
• Coordinates: 2275360..2276061 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain UMB001
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2270360..2281061

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ229_RS11515 (ACJ229_11525)	kdsB	2270883..2271644 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACJ229_RS11520 (ACJ229_11530)	-	2271656..2272636 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACJ229_RS11525 (ACJ229_11535)	-	2272648..2272989 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACJ229_RS11530 (ACJ229_11540)	-	2273007..2273780 (+)	774	WP_000497298.1	TatD family hydrolase	-
ACJ229_RS11535 (ACJ229_11545)	-	2273818..2274426 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACJ229_RS11540 (ACJ229_11550)	-	2274436..2274990 (+)	555	WP_000841373.1	type II secretion system protein	-
ACJ229_RS11545 (ACJ229_11555)	xcpV	2274980..2275360 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACJ229_RS11550 (ACJ229_11560)	xcpW	2275360..2276061 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACJ229_RS11555 (ACJ229_11565)	gspK	2276061..2277020 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACJ229_RS11560 (ACJ229_11570)	-	2277251..2277847 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ACJ229_RS11565 (ACJ229_11575)	ung	2277898..2278611 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACJ229_RS11570 (ACJ229_11580)	-	2278608..2279732 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACJ229_RS11575 (ACJ229_11585)	tadA	2279739..2280242 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACJ229_RS11580 (ACJ229_11590)	-	2280312..2280755 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1078556 ACJ229_RS11550 WP_000594589.1 2275360..2276061(+) (xcpW) [Acinetobacter baumannii strain UMB001]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1078556 ACJ229_RS11550 WP_000594589.1 2275360..2276061(+) (xcpW) [Acinetobacter baumannii strain UMB001]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996