Detailed information NTG0107848

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: AACH38_RS07785
• Genome accession: NZ_AP028992
• Coordinates: 1621040..1621537 (-)
• Length: 165 a.a.
• NCBI ID: WP_029697681.1
• Uniprot ID: A0AAE2ZZ83
• Organism: Staphylococcus aureus strain TUM19957
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1616040..1626537

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACH38_RS07760 (TUM19957_14860)	gcvPB	1616202..1617674 (-)	1473	WP_000202191.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
AACH38_RS07765 (TUM19957_14870)	gcvPA	1617667..1619013 (-)	1347	WP_000019688.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
AACH38_RS07770 (TUM19957_14880)	gcvT	1619033..1620124 (-)	1092	WP_000093355.1	glycine cleavage system aminomethyltransferase GcvT	-
AACH38_RS07775 (TUM19957_14890)	-	1620283..1620807 (-)	525	WP_001015122.1	shikimate kinase	-
AACH38_RS07780	-	1620797..1620943 (-)	147	WP_001789879.1	hypothetical protein	-
AACH38_RS07785 (TUM19957_14900)	comGF	1621040..1621537 (-)	498	WP_029697681.1	competence type IV pilus minor pilin ComGF	Machinery gene
AACH38_RS07790 (TUM19957_14910)	comGE	1621455..1621754 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
AACH38_RS07795 (TUM19957_14920)	comGD	1621741..1622187 (-)	447	WP_075583651.1	competence type IV pilus minor pilin ComGD	Machinery gene
AACH38_RS07800 (TUM19957_14930)	comGC	1622165..1622476 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
AACH38_RS07805 (TUM19957_14940)	comGB	1622490..1623560 (-)	1071	WP_000776403.1	competence type IV pilus assembly protein ComGB	Machinery gene
AACH38_RS07810 (TUM19957_14950)	comGA	1623532..1624506 (-)	975	WP_000697215.1	competence type IV pilus ATPase ComGA	Machinery gene
AACH38_RS07815 (TUM19957_14960)	-	1624558..1625181 (-)	624	WP_001223006.1	MBL fold metallo-hydrolase	-
AACH38_RS07820 (TUM19957_14970)	-	1625178..1625507 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
AACH38_RS07825 (TUM19957_14980)	-	1625507..1626493 (-)	987	WP_000161315.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19211.94 Da
• Isoelectric Point: 10.2436

>NTDB_id=107848 AACH38_RS07785 WP_029697681.1 1621040..1621537(-) (comGF) [Staphylococcus aureus strain TUM19957]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFRGVDRNDIEIRQQRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVTAFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=107848 AACH38_RS07785 WP_029697681.1 1621040..1621537(-) (comGF) [Staphylococcus aureus strain TUM19957]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTTATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAGAGGTGTAGATAGAAACGATATTGAAATTAGGCAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CAGCATTTACTGCAAATATCTACTATAAATCTATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (69-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus N315	97.576	100	0.976
comGF	Staphylococcus aureus MW2	97.576	100	0.976