Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ACJ23A_RS17950 | Genome accession | NZ_CP175648 |
| Coordinates | 3793065..3793538 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214065.1 | Uniprot ID | N9K1Q3 |
| Organism | Acinetobacter baumannii strain LUH5537 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3788065..3798538
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJ23A_RS17925 (ACJ23A_17925) | - | 3788528..3790633 (-) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| ACJ23A_RS17930 (ACJ23A_17930) | - | 3790673..3790803 (-) | 131 | Protein_3494 | hypothetical protein | - |
| ACJ23A_RS17935 (ACJ23A_17935) | rpoZ | 3790842..3791120 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ACJ23A_RS17940 (ACJ23A_17940) | gmk | 3791193..3791822 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| ACJ23A_RS17945 (ACJ23A_17945) | ispH | 3791945..3792895 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACJ23A_RS17950 (ACJ23A_17950) | fimU | 3793065..3793538 (+) | 474 | WP_001214065.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| ACJ23A_RS17955 (ACJ23A_17955) | pilV | 3793532..3794092 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ACJ23A_RS17960 (ACJ23A_17960) | pilW | 3794093..3795094 (+) | 1002 | WP_000079200.1 | PilW family protein | Machinery gene |
| ACJ23A_RS17965 (ACJ23A_17965) | pilX | 3795091..3795909 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.43 Da Isoelectric Point: 8.5355
>NTDB_id=1078456 ACJ23A_RS17950 WP_001214065.1 3793065..3793538(+) (fimU) [Acinetobacter baumannii strain LUH5537]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=1078456 ACJ23A_RS17950 WP_001214065.1 3793065..3793538(+) (fimU) [Acinetobacter baumannii strain LUH5537]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |