Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACJ23A_RS07540 | Genome accession | NZ_CP175648 |
| Coordinates | 1634128..1634508 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain LUH5537 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1629128..1639508
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJ23A_RS07510 (ACJ23A_07510) | tadA | 1629246..1629749 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| ACJ23A_RS07515 (ACJ23A_07515) | - | 1629756..1630880 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACJ23A_RS07520 (ACJ23A_07520) | ung | 1630877..1631590 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACJ23A_RS07525 (ACJ23A_07525) | - | 1631641..1632237 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| ACJ23A_RS07530 (ACJ23A_07530) | gspK | 1632468..1633427 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACJ23A_RS07535 (ACJ23A_07535) | xcpW | 1633427..1634128 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACJ23A_RS07540 (ACJ23A_07540) | xcpV | 1634128..1634508 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACJ23A_RS07545 (ACJ23A_07545) | - | 1634498..1635052 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACJ23A_RS07550 (ACJ23A_07550) | - | 1635062..1635670 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACJ23A_RS07555 (ACJ23A_07555) | - | 1635708..1636481 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACJ23A_RS07560 (ACJ23A_07560) | - | 1636499..1636840 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACJ23A_RS07565 (ACJ23A_07565) | - | 1636852..1637832 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACJ23A_RS07570 (ACJ23A_07570) | kdsB | 1637844..1638605 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1078425 ACJ23A_RS07540 WP_000836911.1 1634128..1634508(-) (xcpV) [Acinetobacter baumannii strain LUH5537]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1078425 ACJ23A_RS07540 WP_000836911.1 1634128..1634508(-) (xcpV) [Acinetobacter baumannii strain LUH5537]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |