Detailed information NTG1078424

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACJ23A_RS07535
• Genome accession: NZ_CP175648
• Coordinates: 1633427..1634128 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain LUH5537
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1628427..1639128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ23A_RS07505 (ACJ23A_07505)	-	1628733..1629176 (-)	444	WP_001246675.1	SRPBCC family protein	-
ACJ23A_RS07510 (ACJ23A_07510)	tadA	1629246..1629749 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACJ23A_RS07515 (ACJ23A_07515)	-	1629756..1630880 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACJ23A_RS07520 (ACJ23A_07520)	ung	1630877..1631590 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACJ23A_RS07525 (ACJ23A_07525)	-	1631641..1632237 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ACJ23A_RS07530 (ACJ23A_07530)	gspK	1632468..1633427 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACJ23A_RS07535 (ACJ23A_07535)	xcpW	1633427..1634128 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACJ23A_RS07540 (ACJ23A_07540)	xcpV	1634128..1634508 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACJ23A_RS07545 (ACJ23A_07545)	-	1634498..1635052 (-)	555	WP_000841373.1	type II secretion system protein	-
ACJ23A_RS07550 (ACJ23A_07550)	-	1635062..1635670 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACJ23A_RS07555 (ACJ23A_07555)	-	1635708..1636481 (-)	774	WP_000497298.1	TatD family hydrolase	-
ACJ23A_RS07560 (ACJ23A_07560)	-	1636499..1636840 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ACJ23A_RS07565 (ACJ23A_07565)	-	1636852..1637832 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACJ23A_RS07570 (ACJ23A_07570)	kdsB	1637844..1638605 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1078424 ACJ23A_RS07535 WP_000594589.1 1633427..1634128(-) (xcpW) [Acinetobacter baumannii strain LUH5537]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1078424 ACJ23A_RS07535 WP_000594589.1 1633427..1634128(-) (xcpW) [Acinetobacter baumannii strain LUH5537]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996