Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACKFA7_RS05550 Genome accession   NZ_CP175553
Coordinates   1130053..1130244 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus amyloliquefaciens strain 4-9-2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1125053..1135244
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKFA7_RS05520 (ACKFA7_05520) argF 1125905..1126876 (+) 972 WP_038457606.1 ornithine carbamoyltransferase -
  ACKFA7_RS05525 (ACKFA7_05525) - 1126952..1127131 (+) 180 WP_003155070.1 YjzC family protein -
  ACKFA7_RS05530 (ACKFA7_05530) - 1127168..1127353 (-) 186 WP_007409129.1 YjzD family protein -
  ACKFA7_RS05535 (ACKFA7_05535) - 1127614..1128348 (+) 735 WP_038457610.1 hypothetical protein -
  ACKFA7_RS05540 (ACKFA7_05540) - 1128431..1128997 (+) 567 WP_038457612.1 hypothetical protein -
  ACKFA7_RS05545 (ACKFA7_05545) med 1129087..1130040 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  ACKFA7_RS05550 (ACKFA7_05550) comZ 1130053..1130244 (+) 192 WP_003155061.1 ComZ family protein Regulator
  ACKFA7_RS05555 (ACKFA7_05555) - 1130273..1130491 (-) 219 WP_007610579.1 hypothetical protein -
  ACKFA7_RS05560 (ACKFA7_05560) - 1130659..1131597 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ACKFA7_RS05565 (ACKFA7_05565) fabF 1131619..1132857 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  ACKFA7_RS05570 (ACKFA7_05570) - 1132940..1133725 (+) 786 WP_029325951.1 DUF2268 domain-containing protein -
  ACKFA7_RS05575 (ACKFA7_05575) - 1133899..1134885 (+) 987 WP_038457614.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=1078127 ACKFA7_RS05550 WP_003155061.1 1130053..1130244(+) (comZ) [Bacillus amyloliquefaciens strain 4-9-2]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1078127 ACKFA7_RS05550 WP_003155061.1 1130053..1130244(+) (comZ) [Bacillus amyloliquefaciens strain 4-9-2]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment