Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   ACKFA7_RS05545 Genome accession   NZ_CP175553
Coordinates   1129087..1130040 (+) Length   317 a.a.
NCBI ID   WP_007409125.1    Uniprot ID   A7Z3B8
Organism   Bacillus amyloliquefaciens strain 4-9-2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1124087..1135040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKFA7_RS05520 (ACKFA7_05520) argF 1125905..1126876 (+) 972 WP_038457606.1 ornithine carbamoyltransferase -
  ACKFA7_RS05525 (ACKFA7_05525) - 1126952..1127131 (+) 180 WP_003155070.1 YjzC family protein -
  ACKFA7_RS05530 (ACKFA7_05530) - 1127168..1127353 (-) 186 WP_007409129.1 YjzD family protein -
  ACKFA7_RS05535 (ACKFA7_05535) - 1127614..1128348 (+) 735 WP_038457610.1 hypothetical protein -
  ACKFA7_RS05540 (ACKFA7_05540) - 1128431..1128997 (+) 567 WP_038457612.1 hypothetical protein -
  ACKFA7_RS05545 (ACKFA7_05545) med 1129087..1130040 (+) 954 WP_007409125.1 BMP family ABC transporter substrate-binding protein Regulator
  ACKFA7_RS05550 (ACKFA7_05550) comZ 1130053..1130244 (+) 192 WP_003155061.1 ComZ family protein Regulator
  ACKFA7_RS05555 (ACKFA7_05555) - 1130273..1130491 (-) 219 WP_007610579.1 hypothetical protein -
  ACKFA7_RS05560 (ACKFA7_05560) - 1130659..1131597 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ACKFA7_RS05565 (ACKFA7_05565) fabF 1131619..1132857 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  ACKFA7_RS05570 (ACKFA7_05570) - 1132940..1133725 (+) 786 WP_029325951.1 DUF2268 domain-containing protein -
  ACKFA7_RS05575 (ACKFA7_05575) - 1133899..1134885 (+) 987 WP_038457614.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35342.99 Da        Isoelectric Point: 4.6686

>NTDB_id=1078126 ACKFA7_RS05545 WP_007409125.1 1129087..1130040(+) (med) [Bacillus amyloliquefaciens strain 4-9-2]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1078126 ACKFA7_RS05545 WP_007409125.1 1129087..1130040(+) (med) [Bacillus amyloliquefaciens strain 4-9-2]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGTGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAACCCGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAAAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTGGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGAACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A7Z3B8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785


Multiple sequence alignment