Detailed information NTG1077752

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACJGE4_RS17890
• Genome accession: NZ_CP174519
• Coordinates: 3579600..3580763 (-)
• Length: 387 a.a.
• NCBI ID: WP_407966260.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JD-3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3574600..3585763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJGE4_RS17860 (ACJGE4_17860)	-	3574864..3575283 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
ACJGE4_RS17865 (ACJGE4_17865)	comFC	3575357..3576046 (-)	690	WP_197200179.1	phosphoribosyltransferase family protein	Machinery gene
ACJGE4_RS17870 (ACJGE4_17870)	-	3576052..3576336 (-)	285	WP_007407481.1	late competence development ComFB family protein	-
ACJGE4_RS17875 (ACJGE4_17875)	comFA	3576394..3577779 (-)	1386	WP_099320008.1	DEAD/DEAH box helicase	Machinery gene
ACJGE4_RS17880 (ACJGE4_17880)	-	3577888..3578736 (-)	849	WP_094031329.1	DegV family protein	-
ACJGE4_RS17885 (ACJGE4_17885)	degU	3578834..3579523 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACJGE4_RS17890 (ACJGE4_17890)	degS	3579600..3580763 (-)	1164	WP_407966260.1	two-component sensor histidine kinase DegS	Regulator
ACJGE4_RS17895 (ACJGE4_17895)	-	3580986..3581633 (+)	648	WP_007407485.1	YigZ family protein	-
ACJGE4_RS17900 (ACJGE4_17900)	-	3581638..3582858 (+)	1221	WP_105937243.1	LCP family protein	-
ACJGE4_RS17905 (ACJGE4_17905)	-	3582957..3584033 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
ACJGE4_RS17910 (ACJGE4_17910)	tuaH	3584166..3585362 (-)	1197	WP_094031330.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45044.87 Da
• Isoelectric Point: 6.8616

>NTDB_id=1077752 ACJGE4_RS17890 WP_407966260.1 3579600..3580763(-) (degS) [Bacillus velezensis strain JD-3]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHMRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1077752 ACJGE4_RS17890 WP_407966260.1 3579600..3580763(-) (degS) [Bacillus velezensis strain JD-3]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATATGCGGCATGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGCGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTAGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948