Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ACJED4_RS10855 | Genome accession | NZ_CP174518 |
| Coordinates | 2094437..2094772 (-) | Length | 111 a.a. |
| NCBI ID | WP_017357978.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain G03 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2089437..2099772
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJED4_RS10805 | comGC | 2089642..2089935 (+) | 294 | WP_008342186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACJED4_RS10810 | comGD | 2089928..2090374 (+) | 447 | WP_035702770.1 | competence type IV pilus minor pilin ComGD | - |
| ACJED4_RS10815 | comGE | 2090358..2090672 (+) | 315 | WP_335372428.1 | competence type IV pilus minor pilin ComGE | - |
| ACJED4_RS10820 | comGF | 2090614..2091111 (+) | 498 | WP_019743636.1 | competence type IV pilus minor pilin ComGF | - |
| ACJED4_RS10825 | - | 2091108..2091491 (+) | 384 | WP_008342190.1 | competence type IV pilus minor pilin ComGG | - |
| ACJED4_RS10830 | - | 2091552..2091746 (+) | 195 | WP_008342191.1 | YqzE family protein | - |
| ACJED4_RS10835 | - | 2091781..2092107 (-) | 327 | WP_039166025.1 | DUF3889 domain-containing protein | - |
| ACJED4_RS10840 | tapA | 2092360..2092887 (+) | 528 | WP_099496603.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACJED4_RS10845 | sipW | 2092938..2093510 (+) | 573 | WP_017357979.1 | signal peptidase I SipW | - |
| ACJED4_RS10850 | tasA | 2093569..2094369 (+) | 801 | WP_008342195.1 | biofilm matrix protein TasA | - |
| ACJED4_RS10855 | sinR | 2094437..2094772 (-) | 336 | WP_017357978.1 | transcriptional regulator SinR | Regulator |
| ACJED4_RS10860 | - | 2094806..2094970 (-) | 165 | WP_008342197.1 | anti-repressor SinI family protein | - |
| ACJED4_RS10865 | - | 2095155..2095952 (-) | 798 | WP_017367588.1 | YqhG family protein | - |
| ACJED4_RS10870 | - | 2095967..2097637 (-) | 1671 | WP_342493017.1 | SNF2-related protein | - |
| ACJED4_RS10875 | gcvT | 2098199..2099296 (+) | 1098 | WP_035390798.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12936.47 Da Isoelectric Point: 4.8062
>NTDB_id=1077655 ACJED4_RS10855 WP_017357978.1 2094437..2094772(-) (sinR) [Bacillus altitudinis strain G03]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLNENDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWKKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1077655 ACJED4_RS10855 WP_017357978.1 2094437..2094772(-) (sinR) [Bacillus altitudinis strain G03]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTAAACGAAAATGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAAAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
92.793 |
100 |
0.928 |