Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACJSOD_RS02215 | Genome accession | NZ_CP174508 |
| Coordinates | 460344..460901 (+) | Length | 185 a.a. |
| NCBI ID | WP_408014393.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain KS1-2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 455344..465901
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJSOD_RS02195 (ACJSOD_02195) | pilR | 456620..457957 (+) | 1338 | WP_104052949.1 | two-component system response regulator PilR | Regulator |
| ACJSOD_RS02200 (ACJSOD_02200) | thiO | 458003..459097 (-) | 1095 | WP_212648728.1 | glycine oxidase ThiO | - |
| ACJSOD_RS02205 (ACJSOD_02205) | - | 459232..459741 (+) | 510 | WP_003102595.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACJSOD_RS02210 (ACJSOD_02210) | - | 459847..460353 (+) | 507 | WP_003102598.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACJSOD_RS02215 (ACJSOD_02215) | pilV | 460344..460901 (+) | 558 | WP_408014393.1 | type 4a pilus minor pilin PilV | Machinery gene |
| ACJSOD_RS02220 (ACJSOD_02220) | pilW | 460898..461722 (+) | 825 | WP_003119422.1 | type 4a pilus minor pilin PilW | - |
| ACJSOD_RS02225 (ACJSOD_02225) | pilX | 461719..462306 (+) | 588 | WP_015648054.1 | type 4a pilus minor pilin PilX | - |
| ACJSOD_RS02230 (ACJSOD_02230) | pilY1 | 462318..465809 (+) | 3492 | WP_116825338.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20083.21 Da Isoelectric Point: 8.4780
>NTDB_id=1077490 ACJSOD_RS02215 WP_408014393.1 460344..460901(+) (pilV) [Pseudomonas aeruginosa strain KS1-2]
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGHLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLHQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGHLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1077490 ACJSOD_RS02215 WP_408014393.1 460344..460901(+) (pilV) [Pseudomonas aeruginosa strain KS1-2]
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCCACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGCACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCCACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCAAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTTGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |