Detailed information NTG1077396

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACJJVB_RS09710
• Genome accession: NZ_CP174502
• Coordinates: 2112212..2114419 (+)
• Length: 735 a.a.
• NCBI ID: WP_177331067.1
• Uniprot ID: -
• Organism: Pseudomonas citronellolis strain ISHS.CFo
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2107212..2119419

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJJVB_RS09690 (ACJJVB_09690)	-	2107600..2108853 (+)	1254	WP_009621388.1	lipoprotein-releasing ABC transporter permease subunit	-
ACJJVB_RS09695 (ACJJVB_09695)	lolD	2108846..2109529 (+)	684	WP_009621390.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
ACJJVB_RS09700 (ACJJVB_09700)	-	2109546..2110796 (+)	1251	WP_009621392.1	lipoprotein-releasing ABC transporter permease subunit	-
ACJJVB_RS09705 (ACJJVB_09705)	-	2111545..2112075 (-)	531	WP_043316177.1	DUF2062 domain-containing protein	-
ACJJVB_RS09710 (ACJJVB_09710)	comA	2112212..2114419 (+)	2208	WP_177331067.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACJJVB_RS09715 (ACJJVB_09715)	exbB	2114492..2115127 (+)	636	WP_009621398.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACJJVB_RS09720 (ACJJVB_09720)	-	2115124..2115570 (+)	447	WP_009621400.1	biopolymer transporter ExbD	-
ACJJVB_RS09725 (ACJJVB_09725)	lpxK	2115570..2116568 (+)	999	WP_043316174.1	tetraacyldisaccharide 4'-kinase	-
ACJJVB_RS09730 (ACJJVB_09730)	-	2116609..2116794 (+)	186	WP_009621404.1	Trm112 family protein	-
ACJJVB_RS09735 (ACJJVB_09735)	kdsB	2116808..2117572 (+)	765	WP_043316171.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACJJVB_RS09740 (ACJJVB_09740)	-	2117572..2118033 (+)	462	WP_043316169.1	low molecular weight protein-tyrosine-phosphatase	-
ACJJVB_RS09745 (ACJJVB_09745)	murB	2118030..2119049 (+)	1020	WP_043316167.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 78432.61 Da
• Isoelectric Point: 8.2204

>NTDB_id=1077396 ACJJVB_RS09710 WP_177331067.1 2112212..2114419(+) (comA) [Pseudomonas citronellolis strain ISHS.CFo]
MMALACGLLLLRFLPQLPPLAALLPLVGMALLCLYRRHHAVALFLLGFAWACLFAHDSWEGRLAPELDGRTLWLEGQVAG
LPASADGIVRFELEDVQARLDLPGRIRVSWYGGPEVRAGERWRLAVTLRRPHGLANDFGFDYEAWLAADGIGATGSVKDG
RRLAEATGPMAWREAWKDRLLAVDARGRNAYLVALVLGDGSGLGRDDWDMLQDTGTLHLMVISGSHISLLGGLLYALVAG
LARLGAWPARVPWLPCACAAALAGAWGYGWIAGLQVPALRACLMLSMVLLWRLHFRRQGVWLPLLGALLVVLLVDPLVSL
TPGFWLSFAAVALLVYGFAGRLGRGAGWLAWGRAQWLMALGLAPVLLALGLPLSPAGALANLIAVPCVELLVVPLALVGS
LLLWLPAVGEGLLWLAGGVLDVLLGLLGRLSLYSPAWHPMAPPAWSIALALFGALLCLAPAGLPLRPLGLALLLPMFWPH
STTPPHGHAEVRVLDVGQGLSVLIRTRQHTWLYDAGPRRGDFDLGEVAVLPTLRGLGVERLDVLLLSHADNDHAGGARSV
AAAVPVARIISGEPGRLPDSLPAGPCGNEAWQLDGVRFSTWQWPGATDSNGRSCVLHVEAGGESLLLTGDLPAAGEAAWL
ASHPGLGADWLLAGHHGSRSASSAAFVRQLAPRAALVSRSRHNAHGHPSSEVLQRFAEQGTKVHDVAREGALRLLLGQRG
TLRGVRENAGFWREK

Nucleotide

• Length: 2208 bp

>NTDB_id=1077396 ACJJVB_RS09710 WP_177331067.1 2112212..2114419(+) (comA) [Pseudomonas citronellolis strain ISHS.CFo]
ATGATGGCGCTGGCCTGCGGCCTGTTGCTGCTGCGTTTCCTGCCCCAGCTGCCACCCTTGGCGGCCCTGCTGCCATTGGT
CGGAATGGCGCTGCTGTGCCTGTATCGGCGACATCACGCGGTGGCGCTCTTCCTGCTCGGCTTCGCCTGGGCCTGCCTGT
TCGCCCATGACTCGTGGGAGGGGCGCCTGGCTCCCGAGCTGGACGGGCGGACGCTGTGGCTGGAAGGGCAGGTTGCCGGC
CTGCCGGCTAGCGCGGATGGCATCGTCCGCTTCGAGCTGGAGGACGTCCAGGCGCGCCTGGACCTGCCCGGGCGCATCCG
CGTGTCCTGGTATGGCGGCCCGGAGGTGCGGGCCGGGGAGCGCTGGCGCCTGGCGGTCACCCTGCGCCGCCCCCATGGCC
TGGCCAACGACTTCGGTTTCGACTATGAAGCCTGGCTGGCGGCCGACGGCATAGGCGCCACCGGCAGCGTCAAGGATGGC
CGGCGCCTGGCCGAGGCCACGGGACCGATGGCTTGGCGCGAAGCCTGGAAGGACCGGCTGCTGGCGGTGGATGCCCGGGG
ACGCAACGCCTACCTGGTGGCCCTGGTCCTCGGCGACGGCAGCGGCCTGGGCCGGGACGACTGGGACATGCTGCAGGACA
CCGGCACCCTGCACCTGATGGTGATCTCCGGCTCGCACATCTCCCTGCTGGGCGGCTTGCTCTACGCCCTGGTGGCGGGT
CTGGCGCGCCTGGGAGCCTGGCCGGCGCGCGTGCCCTGGCTGCCCTGCGCCTGTGCCGCCGCACTGGCTGGCGCCTGGGG
CTATGGCTGGATCGCCGGGCTGCAGGTGCCGGCATTGCGCGCTTGCCTGATGCTCAGCATGGTGCTGCTGTGGCGCCTGC
ACTTTCGTCGCCAGGGCGTCTGGCTGCCGCTGCTCGGCGCTCTGCTGGTGGTGCTGCTGGTCGATCCATTGGTCAGCCTG
ACGCCCGGCTTCTGGCTGTCCTTCGCCGCCGTGGCGCTGCTCGTCTACGGCTTCGCCGGGCGCCTGGGGCGGGGGGCCGG
CTGGCTGGCCTGGGGGCGCGCGCAGTGGCTCATGGCCCTCGGGCTGGCACCGGTGTTGCTGGCCCTGGGCCTGCCGCTGA
GTCCCGCCGGCGCGCTGGCGAACCTGATCGCGGTGCCCTGTGTCGAGTTGCTGGTGGTGCCCCTGGCGCTGGTCGGCAGC
CTGCTGCTGTGGCTGCCGGCGGTGGGCGAGGGGCTGCTATGGCTGGCCGGTGGCGTGCTCGACGTGCTGCTGGGCCTGCT
CGGGCGCCTGTCGCTGTATTCCCCGGCCTGGCATCCCATGGCACCGCCGGCCTGGAGCATCGCCCTGGCCCTGTTCGGCG
CGCTGCTGTGCCTGGCGCCGGCCGGGCTGCCGCTGCGCCCGCTGGGCCTGGCGTTGCTGTTGCCGATGTTCTGGCCGCAT
TCCACTACGCCGCCCCATGGCCATGCCGAAGTGCGGGTGCTGGACGTGGGCCAGGGGCTGTCCGTGCTGATCCGCACCCG
CCAGCACACCTGGCTGTACGACGCCGGACCGCGCCGGGGCGATTTCGACCTCGGCGAGGTGGCGGTGCTGCCGACTCTTC
GTGGCCTGGGCGTCGAACGCCTGGACGTGCTGCTGCTCAGCCATGCCGACAACGACCACGCCGGCGGCGCCCGCTCGGTG
GCGGCGGCCGTGCCGGTAGCGCGGATCATCAGCGGCGAGCCCGGGCGTTTGCCGGACAGCCTGCCTGCCGGCCCCTGCGG
CAACGAGGCATGGCAGCTGGACGGCGTGCGCTTCTCCACCTGGCAGTGGCCCGGCGCGACGGACAGCAACGGTCGCTCCT
GCGTGCTGCACGTCGAGGCTGGCGGCGAGAGCCTGCTGCTCACCGGCGACCTGCCGGCCGCAGGCGAGGCCGCCTGGCTG
GCCAGCCATCCTGGGCTTGGCGCCGACTGGCTGCTGGCCGGCCACCATGGCAGCCGCAGCGCCTCTTCCGCGGCCTTCGT
CAGGCAACTGGCGCCCCGCGCGGCGCTGGTTTCCCGCTCGCGGCACAACGCCCATGGCCATCCGTCCAGCGAGGTGCTGC
AACGCTTTGCCGAGCAGGGGACGAAGGTGCACGATGTGGCCCGGGAGGGCGCCCTGCGCCTGCTCCTGGGCCAGCGCGGA
ACGCTGCGCGGCGTGCGCGAAAATGCCGGATTCTGGAGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (195-458)

• Metallo-beta-lactamase superfamily (Lactamase_B) (495-677)

• Domain of unknown function (DUF4131) (DUF4131) (16-162)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	57.222	97.959	0.561
comA	Ralstonia pseudosolanacearum GMI1000	35.573	100	0.367