Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACJRPX_RS01870 | Genome accession | NZ_CP174475 |
| Coordinates | 393572..394210 (+) | Length | 212 a.a. |
| NCBI ID | WP_338755344.1 | Uniprot ID | - |
| Organism | Moraxella lincolnii strain CCUG 52988 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 388572..399210
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJRPX_RS01860 (ACJRPX_01860) | uvrA | 390068..392956 (-) | 2889 | WP_338755346.1 | excinuclease ABC subunit UvrA | - |
| ACJRPX_RS01865 (ACJRPX_01865) | - | 393297..393497 (+) | 201 | WP_411350682.1 | hypothetical protein | - |
| ACJRPX_RS01870 (ACJRPX_01870) | ssb | 393572..394210 (+) | 639 | WP_338755344.1 | single-stranded DNA-binding protein | Machinery gene |
| ACJRPX_RS01875 (ACJRPX_01875) | smpB | 394238..394708 (+) | 471 | WP_078308278.1 | SsrA-binding protein SmpB | - |
| ACJRPX_RS01880 (ACJRPX_01880) | - | 394715..395074 (-) | 360 | WP_338755343.1 | DUF423 domain-containing protein | - |
| ACJRPX_RS01885 (ACJRPX_01885) | rpoH | 395085..396062 (-) | 978 | WP_338755342.1 | RNA polymerase sigma factor RpoH | - |
| ACJRPX_RS01890 (ACJRPX_01890) | - | 396244..396648 (-) | 405 | WP_143823343.1 | sulfurtransferase TusA family protein | - |
| ACJRPX_RS01895 (ACJRPX_01895) | - | 396998..398566 (+) | 1569 | WP_338755341.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 212 a.a. Molecular weight: 23499.18 Da Isoelectric Point: 6.9895
>NTDB_id=1077256 ACJRPX_RS01870 WP_338755344.1 393572..394210(+) (ssb) [Moraxella lincolnii strain CCUG 52988]
MRGVNKVIIVGNLGADPEVRQFNNGGNVTNISVATSEQWNDKQTGEPREATEWHRISLFNRLGEVAAQYLRKGSKVYIEG
SLRTRKYQDQNGQERYITEIRADNMQMLDSANSARGGVANQNHQGGYQSGYQGGHQGYGNFQNQNGNPNGNQSGFQNHQN
TANAYQNNFNNNNFNNTDNHSAQQAGQNNQNQPKPNNAVAMQPAPADEDIPF
MRGVNKVIIVGNLGADPEVRQFNNGGNVTNISVATSEQWNDKQTGEPREATEWHRISLFNRLGEVAAQYLRKGSKVYIEG
SLRTRKYQDQNGQERYITEIRADNMQMLDSANSARGGVANQNHQGGYQSGYQGGHQGYGNFQNQNGNPNGNQSGFQNHQN
TANAYQNNFNNNNFNNTDNHSAQQAGQNNQNQPKPNNAVAMQPAPADEDIPF
Nucleotide
Download Length: 639 bp
>NTDB_id=1077256 ACJRPX_RS01870 WP_338755344.1 393572..394210(+) (ssb) [Moraxella lincolnii strain CCUG 52988]
ATGCGAGGCGTTAATAAAGTCATCATCGTTGGCAACCTTGGGGCTGACCCAGAAGTGCGTCAGTTTAATAATGGAGGCAA
TGTTACCAACATATCCGTTGCCACCAGTGAGCAATGGAATGACAAACAAACAGGAGAGCCTCGTGAAGCCACCGAATGGC
ATCGCATCAGTCTGTTTAACCGTCTGGGTGAAGTCGCTGCTCAATATTTGCGTAAAGGCAGTAAAGTGTATATCGAAGGC
AGTCTGCGTACTCGTAAATACCAAGACCAAAATGGACAGGAGCGTTACATCACTGAAATCCGTGCTGACAACATGCAAAT
GCTTGACAGTGCCAACAGTGCCAGAGGAGGAGTCGCTAACCAAAATCATCAAGGCGGTTATCAAAGTGGTTATCAAGGCG
GCCATCAAGGCTATGGTAACTTCCAAAACCAAAATGGCAACCCAAATGGCAATCAAAGTGGATTTCAAAACCATCAAAAC
ACTGCCAATGCCTATCAAAATAACTTTAACAATAACAACTTTAACAACACCGACAATCACTCAGCCCAACAAGCAGGGCA
AAACAATCAAAATCAACCCAAACCCAATAACGCCGTTGCCATGCAGCCAGCACCTGCCGATGAAGACATTCCGTTTTAA
ATGCGAGGCGTTAATAAAGTCATCATCGTTGGCAACCTTGGGGCTGACCCAGAAGTGCGTCAGTTTAATAATGGAGGCAA
TGTTACCAACATATCCGTTGCCACCAGTGAGCAATGGAATGACAAACAAACAGGAGAGCCTCGTGAAGCCACCGAATGGC
ATCGCATCAGTCTGTTTAACCGTCTGGGTGAAGTCGCTGCTCAATATTTGCGTAAAGGCAGTAAAGTGTATATCGAAGGC
AGTCTGCGTACTCGTAAATACCAAGACCAAAATGGACAGGAGCGTTACATCACTGAAATCCGTGCTGACAACATGCAAAT
GCTTGACAGTGCCAACAGTGCCAGAGGAGGAGTCGCTAACCAAAATCATCAAGGCGGTTATCAAAGTGGTTATCAAGGCG
GCCATCAAGGCTATGGTAACTTCCAAAACCAAAATGGCAACCCAAATGGCAATCAAAGTGGATTTCAAAACCATCAAAAC
ACTGCCAATGCCTATCAAAATAACTTTAACAATAACAACTTTAACAACACCGACAATCACTCAGCCCAACAAGCAGGGCA
AAACAATCAAAATCAACCCAAACCCAATAACGCCGTTGCCATGCAGCCAGCACCTGCCGATGAAGACATTCCGTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
49.074 |
100 |
0.5 |