Detailed information
Bioinformatically predicted
Overview
| Name | cqsS | Type | Regulator |
| Locus tag | ACJD0W_RS18585 | Genome accession | NZ_CP174457 |
| Coordinates | 755824..757869 (+) | Length | 681 a.a. |
| NCBI ID | WP_407834053.1 | Uniprot ID | - |
| Organism | Vibrio rotiferianus strain BD182406 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 750824..762869
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJD0W_RS18570 | dcuC | 751873..753240 (-) | 1368 | WP_010452174.1 | anaerobic C4-dicarboxylate transporter DcuC | - |
| ACJD0W_RS18575 | - | 753616..754740 (-) | 1125 | WP_045458627.1 | fatty acid desaturase | - |
| ACJD0W_RS18580 | - | 755032..755580 (+) | 549 | WP_010452170.1 | GNAT family N-acetyltransferase | - |
| ACJD0W_RS18585 | cqsS | 755824..757869 (+) | 2046 | WP_407834053.1 | response regulator | Regulator |
| ACJD0W_RS18590 | cqsA | 757916..759097 (-) | 1182 | WP_407833943.1 | alpha-hydroxyketone-type quorum-sensing autoinducer synthase | Regulator |
| ACJD0W_RS18595 | ylqF | 759394..760338 (-) | 945 | WP_407833944.1 | ribosome biogenesis GTPase YlqF | - |
| ACJD0W_RS18600 | - | 760630..761355 (+) | 726 | WP_071234395.1 | nitroreductase family protein | - |
| ACJD0W_RS18605 | - | 761607..762587 (+) | 981 | WP_010452160.1 | chemotaxis protein | - |
Sequence
Protein
Download Length: 681 a.a. Molecular weight: 78437.35 Da Isoelectric Point: 5.4046
>NTDB_id=1077144 ACJD0W_RS18585 WP_407834053.1 755824..757869(+) (cqsS) [Vibrio rotiferianus strain BD182406]
MDALRKVYQYAEPNLTLVGWMGFVGFPTYFIVWEYLFPQPYENLPLRLFCSLLFLGIIVRNKLSSRLKANMHWYYQFAIT
LCLPFFFFYMLLMNDWSNVWVMSFMSAIFLHILLVHITRVMFIQTFVGVFLATFFAWASKGFHLHITMDWTHVPIFLFIY
LFGNLFYFRNQVEHEAKVSIAKSFGAGIAHEMRNPLSGLCSSIDVMQSIIPDPKQEKKDTYQLSIEDIELLREISDDAMK
MIQSGNETIDLLLTSIDENRVSRATFKKHNVQQVIENAIESFSYKRASDRAAISIDIRSSFDFLGSDTLLKYVVYNLFKN
AFHHRSSEDFHIHVTVESNDNANRIVVTDNGAGISVDALENIFRDFYTTGKSGNYGLGLPFCKKVMRSFGGDIKCVSELG
EWSQFTLTFPLLNSPVVEEIKDELIKLKSVLLISNQKILVSKATDLSRHMGFQFDVINTLDVFNKKEYEFEYDVIFVDLE
SIDIRGTQLDRIESLLSFTEGRIVYLFQQHSPSRPIKAGYFPIWMETQAWLLNTYTTIERLLFDVDYESAAAPIREIEHD
NRRTIMVVDDNESLRKFTALLLEKQGFDVIQKEDGEQALEALSSESIDLILMDIEMPVMDGIETSRKIRSSKCAYSTIPI
IAHTGDSSPVTLEKIESSGMSDFIVKPADKARLFDKIAHWI
MDALRKVYQYAEPNLTLVGWMGFVGFPTYFIVWEYLFPQPYENLPLRLFCSLLFLGIIVRNKLSSRLKANMHWYYQFAIT
LCLPFFFFYMLLMNDWSNVWVMSFMSAIFLHILLVHITRVMFIQTFVGVFLATFFAWASKGFHLHITMDWTHVPIFLFIY
LFGNLFYFRNQVEHEAKVSIAKSFGAGIAHEMRNPLSGLCSSIDVMQSIIPDPKQEKKDTYQLSIEDIELLREISDDAMK
MIQSGNETIDLLLTSIDENRVSRATFKKHNVQQVIENAIESFSYKRASDRAAISIDIRSSFDFLGSDTLLKYVVYNLFKN
AFHHRSSEDFHIHVTVESNDNANRIVVTDNGAGISVDALENIFRDFYTTGKSGNYGLGLPFCKKVMRSFGGDIKCVSELG
EWSQFTLTFPLLNSPVVEEIKDELIKLKSVLLISNQKILVSKATDLSRHMGFQFDVINTLDVFNKKEYEFEYDVIFVDLE
SIDIRGTQLDRIESLLSFTEGRIVYLFQQHSPSRPIKAGYFPIWMETQAWLLNTYTTIERLLFDVDYESAAAPIREIEHD
NRRTIMVVDDNESLRKFTALLLEKQGFDVIQKEDGEQALEALSSESIDLILMDIEMPVMDGIETSRKIRSSKCAYSTIPI
IAHTGDSSPVTLEKIESSGMSDFIVKPADKARLFDKIAHWI
Nucleotide
Download Length: 2046 bp
>NTDB_id=1077144 ACJD0W_RS18585 WP_407834053.1 755824..757869(+) (cqsS) [Vibrio rotiferianus strain BD182406]
ATGGATGCATTGCGTAAGGTATACCAGTATGCAGAGCCGAATCTGACGTTAGTTGGTTGGATGGGGTTTGTTGGCTTTCC
GACGTACTTTATTGTATGGGAGTACTTGTTCCCACAGCCATACGAAAACTTACCGCTGCGCTTGTTTTGCTCACTTCTAT
TTCTCGGGATTATCGTTAGAAACAAATTAAGCTCTCGCCTAAAAGCAAACATGCATTGGTACTATCAGTTTGCTATAACC
CTTTGCTTACCATTTTTCTTTTTCTATATGTTGCTGATGAATGATTGGTCCAATGTTTGGGTTATGTCATTTATGTCGGC
GATTTTTTTGCATATCCTTTTGGTCCATATCACTCGAGTGATGTTTATCCAAACGTTCGTTGGGGTTTTTCTGGCTACGT
TTTTTGCGTGGGCCTCGAAAGGGTTTCACCTGCATATAACGATGGATTGGACTCATGTTCCGATCTTTTTGTTTATCTAT
CTTTTCGGCAATCTATTTTATTTTAGAAACCAAGTTGAACATGAAGCGAAAGTATCAATAGCTAAGTCATTTGGAGCGGG
GATTGCTCACGAAATGCGTAACCCGTTAAGCGGGCTTTGCTCTTCCATCGATGTGATGCAGTCAATTATTCCAGATCCAA
AACAAGAGAAAAAAGACACTTATCAACTGTCCATTGAAGATATTGAGTTATTGCGCGAGATTAGCGATGACGCAATGAAA
ATGATTCAGTCAGGTAATGAGACTATCGATTTGTTGCTGACATCAATAGATGAGAATAGAGTTTCTCGCGCTACCTTTAA
AAAGCATAATGTCCAACAAGTGATTGAAAATGCAATTGAAAGTTTCAGCTACAAGCGAGCGTCAGATAGGGCGGCAATAT
CAATCGATATCCGGAGTAGCTTTGACTTTTTAGGTAGTGACACTTTGTTAAAGTACGTAGTTTACAACCTATTTAAAAAT
GCATTTCATCATCGCAGTTCAGAAGACTTCCATATTCACGTGACCGTTGAGTCGAACGATAATGCCAACCGTATTGTTGT
TACTGATAATGGGGCTGGGATCTCGGTTGATGCTCTTGAAAACATTTTTAGGGACTTCTATACAACCGGTAAATCTGGAA
ATTATGGGCTTGGCTTGCCATTTTGTAAGAAGGTCATGCGCTCCTTCGGTGGTGATATTAAATGTGTCTCTGAGCTTGGA
GAGTGGTCTCAATTTACGCTGACATTTCCTCTTCTTAATTCGCCAGTAGTAGAAGAAATAAAGGATGAGTTAATCAAGTT
GAAATCAGTACTGTTGATATCTAACCAAAAGATCCTGGTGAGTAAGGCGACAGACTTAAGTCGTCATATGGGGTTTCAGT
TTGATGTTATTAATACGTTGGATGTCTTCAATAAGAAAGAGTACGAGTTCGAGTATGACGTGATTTTTGTCGACCTTGAA
AGTATTGATATCCGAGGAACACAGCTGGATAGAATTGAATCACTTCTATCATTTACAGAAGGGCGAATCGTTTACTTATT
CCAGCAGCATTCACCATCTCGTCCAATTAAGGCTGGCTATTTCCCTATCTGGATGGAGACTCAAGCTTGGTTACTAAACA
CTTACACGACTATCGAACGGTTATTGTTTGATGTTGATTATGAGTCTGCTGCGGCCCCTATTAGAGAAATAGAGCACGAT
AACAGAAGGACTATCATGGTCGTTGACGATAACGAATCGCTACGAAAGTTCACCGCGTTGTTGTTAGAAAAGCAGGGGTT
TGATGTTATTCAGAAAGAAGATGGCGAACAAGCATTGGAAGCTTTGAGTTCTGAAAGTATTGATTTAATTTTAATGGATA
TTGAAATGCCAGTGATGGATGGGATTGAAACATCGCGCAAGATTCGTAGTTCGAAGTGTGCTTACTCGACTATTCCAATT
ATTGCACATACAGGTGATAGCTCACCGGTGACACTTGAAAAGATAGAGTCATCAGGCATGTCTGATTTTATCGTCAAGCC
AGCTGATAAAGCTCGATTGTTTGACAAAATTGCTCATTGGATATAG
ATGGATGCATTGCGTAAGGTATACCAGTATGCAGAGCCGAATCTGACGTTAGTTGGTTGGATGGGGTTTGTTGGCTTTCC
GACGTACTTTATTGTATGGGAGTACTTGTTCCCACAGCCATACGAAAACTTACCGCTGCGCTTGTTTTGCTCACTTCTAT
TTCTCGGGATTATCGTTAGAAACAAATTAAGCTCTCGCCTAAAAGCAAACATGCATTGGTACTATCAGTTTGCTATAACC
CTTTGCTTACCATTTTTCTTTTTCTATATGTTGCTGATGAATGATTGGTCCAATGTTTGGGTTATGTCATTTATGTCGGC
GATTTTTTTGCATATCCTTTTGGTCCATATCACTCGAGTGATGTTTATCCAAACGTTCGTTGGGGTTTTTCTGGCTACGT
TTTTTGCGTGGGCCTCGAAAGGGTTTCACCTGCATATAACGATGGATTGGACTCATGTTCCGATCTTTTTGTTTATCTAT
CTTTTCGGCAATCTATTTTATTTTAGAAACCAAGTTGAACATGAAGCGAAAGTATCAATAGCTAAGTCATTTGGAGCGGG
GATTGCTCACGAAATGCGTAACCCGTTAAGCGGGCTTTGCTCTTCCATCGATGTGATGCAGTCAATTATTCCAGATCCAA
AACAAGAGAAAAAAGACACTTATCAACTGTCCATTGAAGATATTGAGTTATTGCGCGAGATTAGCGATGACGCAATGAAA
ATGATTCAGTCAGGTAATGAGACTATCGATTTGTTGCTGACATCAATAGATGAGAATAGAGTTTCTCGCGCTACCTTTAA
AAAGCATAATGTCCAACAAGTGATTGAAAATGCAATTGAAAGTTTCAGCTACAAGCGAGCGTCAGATAGGGCGGCAATAT
CAATCGATATCCGGAGTAGCTTTGACTTTTTAGGTAGTGACACTTTGTTAAAGTACGTAGTTTACAACCTATTTAAAAAT
GCATTTCATCATCGCAGTTCAGAAGACTTCCATATTCACGTGACCGTTGAGTCGAACGATAATGCCAACCGTATTGTTGT
TACTGATAATGGGGCTGGGATCTCGGTTGATGCTCTTGAAAACATTTTTAGGGACTTCTATACAACCGGTAAATCTGGAA
ATTATGGGCTTGGCTTGCCATTTTGTAAGAAGGTCATGCGCTCCTTCGGTGGTGATATTAAATGTGTCTCTGAGCTTGGA
GAGTGGTCTCAATTTACGCTGACATTTCCTCTTCTTAATTCGCCAGTAGTAGAAGAAATAAAGGATGAGTTAATCAAGTT
GAAATCAGTACTGTTGATATCTAACCAAAAGATCCTGGTGAGTAAGGCGACAGACTTAAGTCGTCATATGGGGTTTCAGT
TTGATGTTATTAATACGTTGGATGTCTTCAATAAGAAAGAGTACGAGTTCGAGTATGACGTGATTTTTGTCGACCTTGAA
AGTATTGATATCCGAGGAACACAGCTGGATAGAATTGAATCACTTCTATCATTTACAGAAGGGCGAATCGTTTACTTATT
CCAGCAGCATTCACCATCTCGTCCAATTAAGGCTGGCTATTTCCCTATCTGGATGGAGACTCAAGCTTGGTTACTAAACA
CTTACACGACTATCGAACGGTTATTGTTTGATGTTGATTATGAGTCTGCTGCGGCCCCTATTAGAGAAATAGAGCACGAT
AACAGAAGGACTATCATGGTCGTTGACGATAACGAATCGCTACGAAAGTTCACCGCGTTGTTGTTAGAAAAGCAGGGGTT
TGATGTTATTCAGAAAGAAGATGGCGAACAAGCATTGGAAGCTTTGAGTTCTGAAAGTATTGATTTAATTTTAATGGATA
TTGAAATGCCAGTGATGGATGGGATTGAAACATCGCGCAAGATTCGTAGTTCGAAGTGTGCTTACTCGACTATTCCAATT
ATTGCACATACAGGTGATAGCTCACCGGTGACACTTGAAAAGATAGAGTCATCAGGCATGTCTGATTTTATCGTCAAGCC
AGCTGATAAAGCTCGATTGTTTGACAAAATTGCTCATTGGATATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cqsS | Vibrio cholerae strain A1552 |
48.905 |
100 |
0.492 |