Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | ACJD0W_RS12315 | Genome accession | NZ_CP174456 |
| Coordinates | 2725587..2726201 (+) | Length | 204 a.a. |
| NCBI ID | WP_010450170.1 | Uniprot ID | A0A2K7SNB8 |
| Organism | Vibrio rotiferianus strain BD182406 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2720587..2731201
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJD0W_RS12295 | - | 2720867..2721784 (-) | 918 | WP_407832466.1 | ABC transporter ATP-binding protein | - |
| ACJD0W_RS12300 | - | 2722025..2723695 (-) | 1671 | WP_038885742.1 | SulP family inorganic anion transporter | - |
| ACJD0W_RS12305 | can | 2723980..2724648 (+) | 669 | WP_010450166.1 | carbonate dehydratase | - |
| ACJD0W_RS12310 | hpt | 2724737..2725267 (-) | 531 | WP_010450168.1 | hypoxanthine phosphoribosyltransferase | - |
| ACJD0W_RS12315 | opaR | 2725587..2726201 (+) | 615 | WP_010450170.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| ACJD0W_RS12320 | lpdA | 2726502..2727932 (-) | 1431 | WP_005438019.1 | dihydrolipoyl dehydrogenase | - |
| ACJD0W_RS12325 | aceF | 2728176..2730068 (-) | 1893 | WP_407832467.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23561.80 Da Isoelectric Point: 6.0765
>NTDB_id=1077123 ACJD0W_RS12315 WP_010450170.1 2725587..2726201(+) (opaR) [Vibrio rotiferianus strain BD182406]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCSEHEPE
HLANLFHGICYSLFVQANRSKSESELASLVNSYLDMLCIYNRDH
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCSEHEPE
HLANLFHGICYSLFVQANRSKSESELASLVNSYLDMLCIYNRDH
Nucleotide
Download Length: 615 bp
>NTDB_id=1077123 ACJD0W_RS12315 WP_010450170.1 2725587..2726201(+) (opaR) [Vibrio rotiferianus strain BD182406]
ATGGACTCAATTGCAAAGAGGCCTCGTACTAGGCTTTCACCTCTTAAACGTAAACAACAACTGATGGAAATCGCTCTAGA
AGTATTTGCTCGTCGCGGCATTGGCCGTGGTGGTCATGCGGATATTGCCGAGATCGCTCAAGTTTCTGTTGCGACTGTAT
TTAACTACTTCCCGACTCGCGAAGATTTGGTGGATGAAGTTCTGAACCATGTTGTTCGTCAGTTCTCTAACTTTTTGTCT
GATAATATTGACTTAGACATTCATGCTCGTGAGAACATCGCCAACATCACTAATGCAATGATTGAGCTAGTAAGCCAAGA
TTGCCACTGGCTGAAAGTATGGTTTGAGTGGAGTGCTTCAACACGTGATGAAGTATGGCCACTTTTTGTAACTACAAACC
GTACCAACCAACTGCTAGTGCAAAACATGTTCATTAAGGCAATCGAACGTGGTGAAGTATGTTCTGAGCATGAACCAGAG
CACTTGGCAAACCTCTTCCATGGCATCTGTTACTCTTTATTTGTGCAAGCAAATCGTTCTAAGAGTGAATCTGAACTAGC
TAGCTTAGTTAATTCTTACCTAGATATGCTTTGCATCTACAACCGCGACCATTAA
ATGGACTCAATTGCAAAGAGGCCTCGTACTAGGCTTTCACCTCTTAAACGTAAACAACAACTGATGGAAATCGCTCTAGA
AGTATTTGCTCGTCGCGGCATTGGCCGTGGTGGTCATGCGGATATTGCCGAGATCGCTCAAGTTTCTGTTGCGACTGTAT
TTAACTACTTCCCGACTCGCGAAGATTTGGTGGATGAAGTTCTGAACCATGTTGTTCGTCAGTTCTCTAACTTTTTGTCT
GATAATATTGACTTAGACATTCATGCTCGTGAGAACATCGCCAACATCACTAATGCAATGATTGAGCTAGTAAGCCAAGA
TTGCCACTGGCTGAAAGTATGGTTTGAGTGGAGTGCTTCAACACGTGATGAAGTATGGCCACTTTTTGTAACTACAAACC
GTACCAACCAACTGCTAGTGCAAAACATGTTCATTAAGGCAATCGAACGTGGTGAAGTATGTTCTGAGCATGAACCAGAG
CACTTGGCAAACCTCTTCCATGGCATCTGTTACTCTTTATTTGTGCAAGCAAATCGTTCTAAGAGTGAATCTGAACTAGC
TAGCTTAGTTAATTCTTACCTAGATATGCTTTGCATCTACAACCGCGACCATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
93.627 |
100 |
0.936 |
| hapR | Vibrio cholerae C6706 |
71.717 |
97.059 |
0.696 |
| hapR | Vibrio cholerae strain A1552 |
71.717 |
97.059 |
0.696 |