Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACIU4M_RS15440 Genome accession   NZ_CP174375
Coordinates   2977575..2977772 (+) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain SF5     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2972575..2982772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIU4M_RS15410 (ACIU4M_15410) - 2972975..2973154 (+) 180 WP_008348517.1 YjzC family protein -
  ACIU4M_RS15415 (ACIU4M_15415) - 2973324..2974589 (+) 1266 WP_007499050.1 MFS transporter -
  ACIU4M_RS15420 (ACIU4M_15420) - 2974709..2974903 (-) 195 WP_024720055.1 YjzD family protein -
  ACIU4M_RS15425 (ACIU4M_15425) - 2975116..2975856 (+) 741 WP_007499048.1 hypothetical protein -
  ACIU4M_RS15430 (ACIU4M_15430) - 2975932..2976507 (+) 576 WP_407708342.1 nad binding enzyme -
  ACIU4M_RS15435 (ACIU4M_15435) med 2976598..2977563 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  ACIU4M_RS15440 (ACIU4M_15440) comZ 2977575..2977772 (+) 198 WP_008348507.1 ComZ family protein Regulator
  ACIU4M_RS15445 (ACIU4M_15445) - 2977783..2978016 (-) 234 WP_008348506.1 hypothetical protein -
  ACIU4M_RS15450 (ACIU4M_15450) - 2978186..2979124 (+) 939 WP_335352653.1 beta-ketoacyl-ACP synthase III -
  ACIU4M_RS15455 (ACIU4M_15455) fabF 2979146..2980387 (+) 1242 WP_407708343.1 beta-ketoacyl-ACP synthase II -
  ACIU4M_RS15460 (ACIU4M_15460) - 2980465..2981259 (+) 795 WP_135009013.1 DUF2268 domain-containing protein -
  ACIU4M_RS15465 (ACIU4M_15465) - 2981430..2982410 (+) 981 WP_160757907.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=1076992 ACIU4M_RS15440 WP_008348507.1 2977575..2977772(+) (comZ) [Bacillus altitudinis strain SF5]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=1076992 ACIU4M_RS15440 WP_008348507.1 2977575..2977772(+) (comZ) [Bacillus altitudinis strain SF5]
ATGCAACACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662

Multiple sequence alignment