Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   ACIU4M_RS15435 Genome accession   NZ_CP174375
Coordinates   2976598..2977563 (+) Length   321 a.a.
NCBI ID   WP_017360174.1    Uniprot ID   A0A6I5SIG8
Organism   Bacillus altitudinis strain SF5     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 2971598..2982563
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIU4M_RS15405 (ACIU4M_15405) argF 2971921..2972871 (+) 951 WP_160757906.1 ornithine carbamoyltransferase -
  ACIU4M_RS15410 (ACIU4M_15410) - 2972975..2973154 (+) 180 WP_008348517.1 YjzC family protein -
  ACIU4M_RS15415 (ACIU4M_15415) - 2973324..2974589 (+) 1266 WP_007499050.1 MFS transporter -
  ACIU4M_RS15420 (ACIU4M_15420) - 2974709..2974903 (-) 195 WP_024720055.1 YjzD family protein -
  ACIU4M_RS15425 (ACIU4M_15425) - 2975116..2975856 (+) 741 WP_007499048.1 hypothetical protein -
  ACIU4M_RS15430 (ACIU4M_15430) - 2975932..2976507 (+) 576 WP_407708342.1 nad binding enzyme -
  ACIU4M_RS15435 (ACIU4M_15435) med 2976598..2977563 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  ACIU4M_RS15440 (ACIU4M_15440) comZ 2977575..2977772 (+) 198 WP_008348507.1 ComZ family protein Regulator
  ACIU4M_RS15445 (ACIU4M_15445) - 2977783..2978016 (-) 234 WP_008348506.1 hypothetical protein -
  ACIU4M_RS15450 (ACIU4M_15450) - 2978186..2979124 (+) 939 WP_335352653.1 beta-ketoacyl-ACP synthase III -
  ACIU4M_RS15455 (ACIU4M_15455) fabF 2979146..2980387 (+) 1242 WP_407708343.1 beta-ketoacyl-ACP synthase II -
  ACIU4M_RS15460 (ACIU4M_15460) - 2980465..2981259 (+) 795 WP_135009013.1 DUF2268 domain-containing protein -
  ACIU4M_RS15465 (ACIU4M_15465) - 2981430..2982410 (+) 981 WP_160757907.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 321 a.a.        Molecular weight: 35889.89 Da        Isoelectric Point: 5.9297

>NTDB_id=1076991 ACIU4M_RS15435 WP_017360174.1 2976598..2977563(+) (med) [Bacillus altitudinis strain SF5]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKTDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=1076991 ACIU4M_RS15435 WP_017360174.1 2976598..2977563(+) (med) [Bacillus altitudinis strain SF5]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTAATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGACGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAACCGACAATCTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACTGTACAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGCGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAATTGCCAAATGAA
AAGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I5SIG8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.65

97.819

0.632


Multiple sequence alignment