Detailed information NTG1076740

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACJA3T_RS14695
• Genome accession: NZ_CP174276
• Coordinates: 3148677..3149837 (+)
• Length: 386 a.a.
• NCBI ID: WP_059575634.1
• Uniprot ID: -
• Organism: Burkholderia semiarida strain SYBS718
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3143677..3154837

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJA3T_RS14665 (ACJA3T_14665)	-	3144319..3144924 (+)	606	WP_059575641.1	50S ribosomal protein L25/general stress protein Ctc	-
ACJA3T_RS14670 (ACJA3T_14670)	pth	3145043..3145642 (+)	600	WP_060009005.1	aminoacyl-tRNA hydrolase	-
ACJA3T_RS14675 (ACJA3T_14675)	hisC	3145761..3146828 (+)	1068	WP_059575638.1	histidinol-phosphate transaminase	-
ACJA3T_RS14680 (ACJA3T_14680)	-	3146909..3147175 (-)	267	WP_006477774.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACJA3T_RS14685 (ACJA3T_14685)	coaD	3147235..3147732 (-)	498	WP_014895999.1	pantetheine-phosphate adenylyltransferase	-
ACJA3T_RS14690 (ACJA3T_14690)	rsmD	3147844..3148458 (-)	615	WP_059575636.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACJA3T_RS14695 (ACJA3T_14695)	pilA	3148677..3149837 (+)	1161	WP_059575634.1	signal recognition particle-docking protein FtsY	Machinery gene
ACJA3T_RS14700 (ACJA3T_14700)	maiA	3149897..3150541 (-)	645	WP_124658689.1	maleylacetoacetate isomerase	-
ACJA3T_RS14705 (ACJA3T_14705)	ybiB	3150722..3151693 (+)	972	WP_104011877.1	DNA-binding protein YbiB	-
ACJA3T_RS14710 (ACJA3T_14710)	leuA	3152072..3153718 (+)	1647	WP_406806141.1	2-isopropylmalate synthase	-
ACJA3T_RS14715 (ACJA3T_14715)	-	3153874..3154257 (-)	384	WP_059642650.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 386 a.a.
• Molecular weight: 40985.77 Da
• Isoelectric Point: 4.6872

>NTDB_id=1076740 ACJA3T_RS14695 WP_059575634.1 3148677..3149837(+) (pilA) [Burkholderia semiarida strain SYBS718]
MFSFFKRFKKTQEPDPAESQSADAQQADEASDADAPALDAPPAAEPPQASAQPAAPAVVMTVTPTNDGRDEVVETVEIVP
PPQQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRAGRLTDPQQV
KDALHDLLVELLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERN
NVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNAL
TQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG

Nucleotide

• Length: 1161 bp

>NTDB_id=1076740 ACJA3T_RS14695 WP_059575634.1 3148677..3149837(+) (pilA) [Burkholderia semiarida strain SYBS718]
ATGTTCAGTTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAGC
GGACGAAGCGTCCGACGCCGACGCGCCCGCGCTCGACGCGCCACCCGCGGCCGAGCCGCCGCAGGCGAGCGCCCAACCGG
CCGCGCCGGCCGTCGTGATGACAGTCACCCCGACCAACGATGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTCCCG
CCGCCGCAGCAGGACGCCTCCGCGAAGAAGTCGTGGCTCGCGCGCCTGAAAACGGGGCTCGCGAAGACGGGCTCGAGCAT
CACCGGCGTCTTCGTCAACACGAAGATCGACGAGGACCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGG
GCGTCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCGCGGGCCGGCTGACCGATCCGCAGCAGGTG
AAGGATGCGCTGCACGACCTGCTCGTCGAGCTGCTGGCGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCT
CGTGATGATGATCGCCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCATCTGCAGAGCTTCG
ACCAGTCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAAC
AACGTGACGGTCGTGCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAA
GATCGACGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGAAGC
GCGTGATCGCGAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTC
ACGCAGGTGAAGGCGTTCGACGACGCGCTGGGCCTGACCGGCCTGATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGG
GATTCTCGCCGCGATCGCGCGGCAACGGCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGC
CGTTCAGCGCGGTGGAATTCGCGGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (187-386)

• SRP54-type protein, helical bundle domain (SRP54_N) (104-166)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	54.087	100	0.583