Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | ACJEIB_RS10050 | Genome accession | NZ_CP174236 |
| Coordinates | 2224938..2225252 (-) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila strain SPF589 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2219938..2230252
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJEIB_RS10025 (ACJEIB_10025) | - | 2220363..2220863 (-) | 501 | WP_129904980.1 | hypothetical protein | - |
| ACJEIB_RS10030 (ACJEIB_10030) | - | 2221355..2222215 (+) | 861 | WP_181444925.1 | polysaccharide deacetylase family protein | - |
| ACJEIB_RS10035 (ACJEIB_10035) | - | 2222333..2223529 (-) | 1197 | WP_027265081.1 | murein transglycosylase A | - |
| ACJEIB_RS10040 (ACJEIB_10040) | lpp1976 | 2223639..2224196 (-) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| ACJEIB_RS10045 (ACJEIB_10045) | lpp1977 | 2224193..2224999 (-) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| ACJEIB_RS10050 (ACJEIB_10050) | lpp1978 | 2224938..2225252 (-) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ACJEIB_RS10055 (ACJEIB_10055) | hisC | 2225412..2226521 (+) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| ACJEIB_RS10060 (ACJEIB_10060) | - | 2226558..2226899 (+) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| ACJEIB_RS10065 (ACJEIB_10065) | secF | 2227089..2228006 (-) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| ACJEIB_RS10070 (ACJEIB_10070) | secD | 2228019..2229875 (-) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| ACJEIB_RS10075 (ACJEIB_10075) | yajC | 2229897..2230232 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=1076145 ACJEIB_RS10050 WP_011215961.1 2224938..2225252(-) (lpp1978) [Legionella pneumophila strain SPF589]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=1076145 ACJEIB_RS10050 WP_011215961.1 2224938..2225252(-) (lpp1978) [Legionella pneumophila strain SPF589]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |