Detailed information NTG0107607

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AABJ90_RS14700
• Genome accession: NZ_AP028964
• Coordinates: 2879928..2880881 (-)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain NA05 = NBRC 116153
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2874928..2885881

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ90_RS14670 (BsubNA05_28510)	appD	2875047..2876033 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
AABJ90_RS14675 (BsubNA05_28520)	yjaZ	2876225..2877010 (-)	786	WP_134982187.1	DUF2268 domain-containing protein	-
AABJ90_RS14680 (BsubNA05_28530)	fabF	2877086..2878327 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
AABJ90_RS14685 (BsubNA05_28540)	fabH	2878350..2879288 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
AABJ90_RS14690 (BsubNA05_28550)	yjzB	2879453..2879692 (+)	240	WP_003232972.1	spore coat protein YjzB	-
AABJ90_RS14695 (BsubNA05_28560)	comZ	2879722..2879913 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
AABJ90_RS14700 (BsubNA05_28570)	med	2879928..2880881 (-)	954	WP_014476425.1	transcriptional regulator Med	Regulator
AABJ90_RS14705 (BsubNA05_28580)	-	2880971..2881528 (-)	558	WP_015252365.1	hypothetical protein	-
AABJ90_RS14710 (BsubNA05_28590)	-	2881610..2882344 (-)	735	WP_003245223.1	hypothetical protein	-
AABJ90_RS14715 (BsubNA05_28600)	yjzD	2882593..2882778 (+)	186	WP_003245236.1	DUF2929 domain-containing protein	-
AABJ90_RS14720 (BsubNA05_28610)	yjzC	2882824..2883003 (-)	180	WP_003245356.1	YjzC family protein	-
AABJ90_RS14725 (BsubNA05_28620)	argF	2883089..2884048 (-)	960	WP_153952064.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=107607 AABJ90_RS14700 WP_014476425.1 2879928..2880881(-) (med) [Bacillus subtilis strain NA05 = NBRC 116153]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=107607 AABJ90_RS14700 WP_014476425.1 2879928..2880881(-) (med) [Bacillus subtilis strain NA05 = NBRC 116153]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997