Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AABJ90_RS08425 | Genome accession | NZ_AP028964 |
| Coordinates | 1626768..1627805 (+) | Length | 345 a.a. |
| NCBI ID | WP_338382615.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain NA05 = NBRC 116153 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1621768..1632805
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABJ90_RS08405 (BsubNA05_16170) | rsbRD | 1621988..1622824 (+) | 837 | WP_015714260.1 | RsbT co-antagonist protein RsbRD | - |
| AABJ90_RS08410 (BsubNA05_16180) | yqhB | 1622877..1624205 (-) | 1329 | WP_338382613.1 | hemolysin family protein | - |
| AABJ90_RS08415 (BsubNA05_16190) | corA | 1624348..1625301 (+) | 954 | WP_338382614.1 | magnesium transporter CorA | - |
| AABJ90_RS08420 (BsubNA05_16200) | comGA | 1625711..1626781 (+) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| AABJ90_RS08425 (BsubNA05_16210) | comGB | 1626768..1627805 (+) | 1038 | WP_338382615.1 | comG operon protein ComGB | Machinery gene |
| AABJ90_RS08430 (BsubNA05_16220) | comGC | 1627819..1628115 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| AABJ90_RS08435 (BsubNA05_16230) | comGD | 1628105..1628536 (+) | 432 | WP_080529538.1 | comG operon protein ComGD | Machinery gene |
| AABJ90_RS08440 (BsubNA05_16240) | comGE | 1628520..1628867 (+) | 348 | WP_080529537.1 | ComG operon protein 5 | Machinery gene |
| AABJ90_RS08445 (BsubNA05_16250) | comGF | 1628893..1629276 (+) | 384 | WP_080529536.1 | ComG operon protein ComGF | Machinery gene |
| AABJ90_RS08450 (BsubNA05_16260) | comGG | 1629277..1629651 (+) | 375 | WP_338382616.1 | ComG operon protein ComGG | Machinery gene |
| AABJ90_RS08455 (BsubNA05_16270) | spoIIT | 1629723..1629902 (+) | 180 | WP_029726723.1 | YqzE family protein | - |
| AABJ90_RS08460 (BsubNA05_16280) | yqzG | 1629944..1630270 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| AABJ90_RS08465 (BsubNA05_16290) | tapA | 1630542..1631303 (+) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AABJ90_RS08470 (BsubNA05_16300) | sipW | 1631287..1631859 (+) | 573 | WP_003230181.1 | signal peptidase I | - |
| AABJ90_RS08475 (BsubNA05_16310) | tasA | 1631923..1632708 (+) | 786 | WP_161476870.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39690.15 Da Isoelectric Point: 9.7153
>NTDB_id=107580 AABJ90_RS08425 WP_338382615.1 1626768..1627805(+) (comGB) [Bacillus subtilis strain NA05 = NBRC 116153]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPVRQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPVRQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=107580 AABJ90_RS08425 WP_338382615.1 1626768..1627805(+) (comGB) [Bacillus subtilis strain NA05 = NBRC 116153]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGTCCGGCAAATGCTGATTTGTATCAGAATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGTCCGGCAAATGCTGATTTGTATCAGAATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |