Detailed information NTG1074946

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACJA24_RS16680
• Genome accession: NZ_CP174198
• Coordinates: 3371332..3372495 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LQ-03
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3366332..3377495

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJA24_RS16650	-	3366597..3367016 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
ACJA24_RS16655	comFC	3367090..3367779 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
ACJA24_RS16660	-	3367785..3368069 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
ACJA24_RS16665	comFA	3368127..3369512 (-)	1386	WP_014305928.1	DEAD/DEAH box helicase	Machinery gene
ACJA24_RS16670	-	3369620..3370468 (-)	849	WP_014305929.1	DegV family protein	-
ACJA24_RS16675	degU	3370566..3371255 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACJA24_RS16680	degS	3371332..3372495 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
ACJA24_RS16685	-	3372718..3373365 (+)	648	WP_003151384.1	YigZ family protein	-
ACJA24_RS16690	-	3373370..3374584 (+)	1215	WP_014305930.1	LCP family protein	-
ACJA24_RS16695	-	3374674..3375750 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
ACJA24_RS16700	tuaH	3375883..3377079 (-)	1197	WP_069013672.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=1074946 ACJA24_RS16680 WP_003151385.1 3371332..3372495(-) (degS) [Bacillus velezensis strain LQ-03]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1074946 ACJA24_RS16680 WP_003151385.1 3371332..3372495(-) (degS) [Bacillus velezensis strain LQ-03]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948