Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ACCH06_RS06525 | Genome accession | NZ_CP174157 |
| Coordinates | 1323407..1323832 (+) | Length | 141 a.a. |
| NCBI ID | WP_081250945.1 | Uniprot ID | - |
| Organism | Bacillus atrophaeus strain SHZ-24 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1318407..1328832
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACCH06_RS06495 | - | 1319823..1320118 (-) | 296 | Protein_1224 | contact-dependent growth inhibition system immunity protein | - |
| ACCH06_RS06500 | - | 1320107..1320427 (+) | 321 | WP_406589897.1 | putative quinol monooxygenase | - |
| ACCH06_RS06505 | - | 1321613..1321894 (-) | 282 | WP_106047291.1 | hypothetical protein | - |
| ACCH06_RS06510 | - | 1322287..1322439 (+) | 153 | Protein_1227 | hypothetical protein | - |
| ACCH06_RS06515 | - | 1322561..1322890 (-) | 330 | WP_406589898.1 | hypothetical protein | - |
| ACCH06_RS06520 | - | 1322950..1323216 (-) | 267 | WP_406589899.1 | hypothetical protein | - |
| ACCH06_RS06525 | nucA/comI | 1323407..1323832 (+) | 426 | WP_081250945.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| ACCH06_RS06530 | - | 1323981..1324643 (+) | 663 | WP_003327513.1 | MgtC/SapB family protein | - |
| ACCH06_RS06535 | - | 1324701..1324940 (-) | 240 | WP_003327512.1 | hypothetical protein | - |
| ACCH06_RS06540 | - | 1325154..1325366 (-) | 213 | WP_003327511.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| ACCH06_RS06545 | - | 1325426..1325641 (-) | 216 | WP_081112782.1 | spore coat protein | - |
| ACCH06_RS06550 | - | 1325956..1327356 (+) | 1401 | WP_406589900.1 | polysaccharide deacetylase family protein | - |
| ACCH06_RS06555 | - | 1327409..1327882 (-) | 474 | WP_063637839.1 | YjfA family protein | - |
| ACCH06_RS06560 | - | 1328019..1328429 (-) | 411 | WP_406589901.1 | DUF2809 domain-containing protein | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15458.32 Da Isoelectric Point: 4.7462
>NTDB_id=1074663 ACCH06_RS06525 WP_081250945.1 1323407..1323832(+) (nucA/comI) [Bacillus atrophaeus strain SHZ-24]
MKKWITSLFLTAAILFGLMGAEVYAPQDVKGASRYDQVLYFPFSRYPETGDHIKDAIAAGHSDVCTIDRAGADERREESL
KGIPTKPGYDRDEWPMAVCEEGGAGADIRYVTPSDNRGAGSWVGNQMSGYSDGTRVLFIVQ
MKKWITSLFLTAAILFGLMGAEVYAPQDVKGASRYDQVLYFPFSRYPETGDHIKDAIAAGHSDVCTIDRAGADERREESL
KGIPTKPGYDRDEWPMAVCEEGGAGADIRYVTPSDNRGAGSWVGNQMSGYSDGTRVLFIVQ
Nucleotide
Download Length: 426 bp
>NTDB_id=1074663 ACCH06_RS06525 WP_081250945.1 1323407..1323832(+) (nucA/comI) [Bacillus atrophaeus strain SHZ-24]
ATGAAAAAATGGATCACGAGCTTATTTCTGACCGCAGCGATATTGTTTGGATTGATGGGTGCGGAAGTGTATGCTCCGCA
GGATGTCAAAGGCGCATCACGGTATGATCAGGTTCTTTACTTCCCATTTTCACGTTATCCTGAAACCGGCGATCACATTA
AAGATGCGATAGCGGCCGGGCATTCAGATGTATGTACGATTGACAGGGCCGGGGCGGATGAGCGCAGGGAGGAGTCTTTA
AAGGGGATTCCTACGAAACCGGGGTATGACCGGGATGAGTGGCCGATGGCTGTATGTGAAGAAGGCGGGGCCGGGGCGGA
TATCCGGTATGTCACCCCATCTGATAATCGAGGCGCCGGTTCATGGGTCGGGAATCAAATGAGCGGTTATTCTGATGGTA
CGAGAGTATTATTTATCGTACAGTAG
ATGAAAAAATGGATCACGAGCTTATTTCTGACCGCAGCGATATTGTTTGGATTGATGGGTGCGGAAGTGTATGCTCCGCA
GGATGTCAAAGGCGCATCACGGTATGATCAGGTTCTTTACTTCCCATTTTCACGTTATCCTGAAACCGGCGATCACATTA
AAGATGCGATAGCGGCCGGGCATTCAGATGTATGTACGATTGACAGGGCCGGGGCGGATGAGCGCAGGGAGGAGTCTTTA
AAGGGGATTCCTACGAAACCGGGGTATGACCGGGATGAGTGGCCGATGGCTGTATGTGAAGAAGGCGGGGCCGGGGCGGA
TATCCGGTATGTCACCCCATCTGATAATCGAGGCGCCGGTTCATGGGTCGGGAATCAAATGAGCGGTTATTCTGATGGTA
CGAGAGTATTATTTATCGTACAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
59.524 |
89.362 |
0.532 |