Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ACJED3_RS21065 | Genome accession | NZ_CP174155 |
| Coordinates | 3959959..3960996 (+) | Length | 345 a.a. |
| NCBI ID | WP_031600685.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain G01 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3954959..3965996
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJED3_RS21040 | rsbRD | 3955179..3956015 (+) | 837 | WP_014480262.1 | RsbT co-antagonist protein RsbRD | - |
| ACJED3_RS21045 | yqhB | 3956068..3957396 (-) | 1329 | WP_014480261.1 | hemolysin family protein | - |
| ACJED3_RS21050 | corA | 3957538..3958491 (+) | 954 | WP_014480260.1 | magnesium transporter CorA | - |
| ACJED3_RS21055 | - | 3958493..3958690 (+) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| ACJED3_RS21060 | comGA | 3958902..3959972 (+) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| ACJED3_RS21065 | comGB | 3959959..3960996 (+) | 1038 | WP_031600685.1 | comG operon protein ComGB | Machinery gene |
| ACJED3_RS21070 | comGC | 3961010..3961306 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| ACJED3_RS21075 | comGD | 3961296..3961727 (+) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| ACJED3_RS21080 | comGE | 3961711..3962058 (+) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| ACJED3_RS21085 | comGF | 3962084..3962467 (+) | 384 | WP_014480254.1 | ComG operon protein ComGF | Machinery gene |
| ACJED3_RS21090 | comGG | 3962468..3962842 (+) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ACJED3_RS21095 | spoIITA | 3962913..3963092 (+) | 180 | WP_014480252.1 | YqzE family protein | - |
| ACJED3_RS21100 | yqzG | 3963134..3963460 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ACJED3_RS21105 | tapA | 3963732..3964493 (+) | 762 | WP_014480251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACJED3_RS21110 | sipW | 3964477..3965049 (+) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| ACJED3_RS21115 | tasA | 3965113..3965898 (+) | 786 | WP_014480250.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39592.99 Da Isoelectric Point: 9.6259
>NTDB_id=1074627 ACJED3_RS21065 WP_031600685.1 3959959..3960996(+) (comGB) [Bacillus subtilis strain G01]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1074627 ACJED3_RS21065 WP_031600685.1 3959959..3960996(+) (comGB) [Bacillus subtilis strain G01]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGTGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGTGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |