Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   AABA74_RS01770 Genome accession   NZ_AP028932
Coordinates   327577..327975 (-) Length   132 a.a.
NCBI ID   WP_014304317.1    Uniprot ID   -
Organism   Bacillus velezensis strain RB.IBE29     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 322577..332975
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABA74_RS01735 - 323577..323738 (-) 162 Protein_301 hypothetical protein -
  AABA74_RS01740 (RBIBE_02990) - 323855..325057 (+) 1203 Protein_302 GTP-binding protein -
  AABA74_RS01745 (RBIBE_03010) - 325122..326258 (+) 1137 WP_052827030.1 zinc-dependent alcohol dehydrogenase -
  AABA74_RS01750 (RBIBE_03020) - 326273..326707 (+) 435 WP_003156592.1 RDD family protein -
  AABA74_RS01755 (RBIBE_03030) - 326779..327099 (+) 321 WP_015388719.1 YckD family protein -
  AABA74_RS01760 - 327203..327319 (+) 117 WP_015388718.1 family 1 glycosylhydrolase -
  AABA74_RS01765 - 327318..327536 (+) 219 Protein_307 family 1 glycosylhydrolase -
  AABA74_RS01770 (RBIBE_03040) nin/comJ 327577..327975 (-) 399 WP_014304317.1 competence protein ComJ Regulator
  AABA74_RS01775 (RBIBE_03050) nucA/comI 327997..328434 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AABA74_RS01780 (RBIBE_03060) hxlB 328793..329350 (-) 558 WP_077721772.1 6-phospho-3-hexuloisomerase -
  AABA74_RS01785 (RBIBE_03070) hxlA 329347..329982 (-) 636 WP_014304319.1 3-hexulose-6-phosphate synthase -
  AABA74_RS01790 (RBIBE_03080) - 330214..330576 (+) 363 WP_003156585.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15049.01 Da        Isoelectric Point: 4.6564

>NTDB_id=107390 AABA74_RS01770 WP_014304317.1 327577..327975(-) (nin/comJ) [Bacillus velezensis strain RB.IBE29]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVFRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=107390 AABA74_RS01770 WP_014304317.1 327577..327975(-) (nin/comJ) [Bacillus velezensis strain RB.IBE29]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCGTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTCGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCTTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTAATGTCAAAGCGGCTTTTCTTTAATATTCCAAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

77.519

97.727

0.758

Multiple sequence alignment