Detailed information
Overview
| Name | radA | Type | Machinery gene |
| Locus tag | ACAM22_RS09765 | Genome accession | NZ_AP028929 |
| Coordinates | 2082296..2083660 (-) | Length | 454 a.a. |
| NCBI ID | WP_261053370.1 | Uniprot ID | - |
| Organism | Streptococcus sp. SN-1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2077296..2088660
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAM22_RS09740 | - | 2078158..2078540 (-) | 383 | Protein_1880 | hypothetical protein | - |
| ACAM22_RS09745 (MASAN616_18760) | - | 2078530..2079501 (-) | 972 | WP_265471997.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| ACAM22_RS09750 (MASAN616_18770) | - | 2079772..2080740 (-) | 969 | WP_000010158.1 | ribose-phosphate diphosphokinase | - |
| ACAM22_RS09755 (MASAN616_18780) | - | 2080886..2081701 (-) | 816 | WP_261053333.1 | PrsW family glutamic-type intramembrane protease | - |
| ACAM22_RS09760 (MASAN616_18790) | - | 2081726..2082223 (-) | 498 | WP_004237611.1 | carbonic anhydrase | - |
| ACAM22_RS09765 (MASAN616_18800) | radA | 2082296..2083660 (-) | 1365 | WP_261053370.1 | DNA repair protein RadA | Machinery gene |
| ACAM22_RS09770 (MASAN616_18810) | - | 2083671..2084186 (-) | 516 | WP_261053336.1 | histidine phosphatase family protein | - |
| ACAM22_RS09775 (MASAN616_18820) | - | 2084205..2084507 (-) | 303 | Protein_1887 | isochorismatase family protein | - |
| ACAM22_RS09780 | - | 2084503..2084643 (-) | 141 | Protein_1888 | DNA repair protein RadA | - |
| ACAM22_RS09785 (MASAN616_18830) | - | 2084674..2085213 (-) | 540 | WP_261053371.1 | histidine phosphatase family protein | - |
| ACAM22_RS09790 (MASAN616_18840) | - | 2085215..2085658 (-) | 444 | WP_000701987.1 | dUTP diphosphatase | - |
| ACAM22_RS09800 (MASAN616_18850) | tadA | 2085845..2086312 (-) | 468 | WP_261053342.1 | tRNA adenosine(34) deaminase TadA | - |
| ACAM22_RS09805 (MASAN616_18860) | - | 2086513..2087799 (-) | 1287 | WP_261053373.1 | adenylosuccinate synthase | - |
| ACAM22_RS09810 (MASAN616_18870) | comW | 2088030..2088266 (-) | 237 | WP_000940045.1 | sigma(X)-activator ComW | Regulator |
Sequence
Protein
Download Length: 454 a.a. Molecular weight: 49531.05 Da Isoelectric Point: 6.8558
>NTDB_id=107366 ACAM22_RS09765 WP_261053370.1 2082296..2083660(-) (radA) [Streptococcus sp. SN-1]
MIAKKKATFVCQNCGYNSPKYLGRCPNCGSWSSFVEEVEVAEVKNARVSLTGEKTKPMKLAEVTSINVNRTKTDMEEFNR
VLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEV
ERIQPNFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGE
RHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGNA
KRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVSIASSYKDKPTNPQECFVGELGLTGEI
RRVNRIEQRINEAAKLGFTKIYVPKNSLTGITPPKEIQVIGVTTIQEVLKKVFA
MIAKKKATFVCQNCGYNSPKYLGRCPNCGSWSSFVEEVEVAEVKNARVSLTGEKTKPMKLAEVTSINVNRTKTDMEEFNR
VLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEV
ERIQPNFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGE
RHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGNA
KRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVSIASSYKDKPTNPQECFVGELGLTGEI
RRVNRIEQRINEAAKLGFTKIYVPKNSLTGITPPKEIQVIGVTTIQEVLKKVFA
Nucleotide
Download Length: 1365 bp
>NTDB_id=107366 ACAM22_RS09765 WP_261053370.1 2082296..2083660(-) (radA) [Streptococcus sp. SN-1]
ATCATCGCAAAGAAAAAAGCGACATTTGTATGTCAAAATTGTGGGTATAATTCCCCTAAATATCTAGGACGTTGTCCCAA
CTGTGGGTCTTGGTCTTCTTTTGTAGAAGAGGTTGAGGTTGCCGAGGTAAAGAATGCGCGTGTGTCCTTGACAGGTGAGA
AAACCAAGCCCATGAAACTGGCTGAGGTGACTTCTATCAACGTTAATCGAACCAAGACGGACATGGAGGAATTCAACCGT
GTACTTGGAGGCGGAGTGGTACCAGGAAGTCTCGTCCTAATCGGTGGGGATCCTGGAATCGGGAAATCGACTCTTCTCCT
ACAAGTCTCAACCCAGTTGTCTCAAGTAGGGACAGTTCTCTACGTCAGTGGGGAGGAGTCTGCCCAGCAGATTAAACTCC
GTGCAGAGCGTTTGGGTGATATTGATAGCGAGTTTTATCTCTATGCAGAGACCAATATGCAGAGTGTTCGAGCTGAGGTA
GAAAGAATCCAGCCAAACTTCCTCATTATTGACTCCATTCAGACCATTATGTCTCCTGAGATTTCAGGGGTGCAGGGGTC
TGTTTCTCAAGTGCGTGAGGTGACAGCTGAACTTATGCAGCTGGCCAAAACTAATAACATTGCCATCTTTATCGTAGGTC
ATGTGACCAAGGAAGGAACCTTGGCTGGTCCTCGTATGCTAGAGCATATGGTGGATACGGTGCTTTACTTTGAAGGAGAG
CGCCACCATACCTTTCGTATTTTGAGAGCGGTCAAAAACCGTTTTGGCTCCACTAATGAGATTGGGATTTTTGAGATGCA
GTCGGGCGGCTTGGTTGAGGTACTCAATCCGAGTCAAGTTTTCCTAGAAGAGCGTTTGGATGGAGCAACTGGTTCATCAA
TCGTTGTGACCATGGAAGGGACGCGTCCGATTTTGGCGGAGGTTCAGGCTTTGGTGACACCGACCATGTTTGGAAATGCC
AAGCGTACTACGACAGGACTTGATTTTAATCGTGCTAGCTTGATTATGGCTGTTTTAGAAAAACGGGCAGGTCTTCTCTT
GCAAAATCAGGACGCCTATCTTAAATCTGCTGGCGGTGTCAAATTGGATGAACCTGCCATTGACTTGGCCGTTGCGGTTT
CCATTGCTTCGAGTTATAAAGACAAGCCAACTAATCCTCAGGAATGTTTTGTAGGAGAGTTAGGCTTGACGGGAGAAATT
CGGCGCGTGAATCGTATTGAGCAGCGCATCAATGAAGCTGCTAAACTGGGTTTTACTAAGATTTATGTACCCAAGAATTC
CTTGACAGGAATCACTCCGCCCAAGGAAATTCAGGTCATTGGCGTAACAACGATTCAGGAAGTTTTGAAAAAGGTCTTTG
CATAA
ATCATCGCAAAGAAAAAAGCGACATTTGTATGTCAAAATTGTGGGTATAATTCCCCTAAATATCTAGGACGTTGTCCCAA
CTGTGGGTCTTGGTCTTCTTTTGTAGAAGAGGTTGAGGTTGCCGAGGTAAAGAATGCGCGTGTGTCCTTGACAGGTGAGA
AAACCAAGCCCATGAAACTGGCTGAGGTGACTTCTATCAACGTTAATCGAACCAAGACGGACATGGAGGAATTCAACCGT
GTACTTGGAGGCGGAGTGGTACCAGGAAGTCTCGTCCTAATCGGTGGGGATCCTGGAATCGGGAAATCGACTCTTCTCCT
ACAAGTCTCAACCCAGTTGTCTCAAGTAGGGACAGTTCTCTACGTCAGTGGGGAGGAGTCTGCCCAGCAGATTAAACTCC
GTGCAGAGCGTTTGGGTGATATTGATAGCGAGTTTTATCTCTATGCAGAGACCAATATGCAGAGTGTTCGAGCTGAGGTA
GAAAGAATCCAGCCAAACTTCCTCATTATTGACTCCATTCAGACCATTATGTCTCCTGAGATTTCAGGGGTGCAGGGGTC
TGTTTCTCAAGTGCGTGAGGTGACAGCTGAACTTATGCAGCTGGCCAAAACTAATAACATTGCCATCTTTATCGTAGGTC
ATGTGACCAAGGAAGGAACCTTGGCTGGTCCTCGTATGCTAGAGCATATGGTGGATACGGTGCTTTACTTTGAAGGAGAG
CGCCACCATACCTTTCGTATTTTGAGAGCGGTCAAAAACCGTTTTGGCTCCACTAATGAGATTGGGATTTTTGAGATGCA
GTCGGGCGGCTTGGTTGAGGTACTCAATCCGAGTCAAGTTTTCCTAGAAGAGCGTTTGGATGGAGCAACTGGTTCATCAA
TCGTTGTGACCATGGAAGGGACGCGTCCGATTTTGGCGGAGGTTCAGGCTTTGGTGACACCGACCATGTTTGGAAATGCC
AAGCGTACTACGACAGGACTTGATTTTAATCGTGCTAGCTTGATTATGGCTGTTTTAGAAAAACGGGCAGGTCTTCTCTT
GCAAAATCAGGACGCCTATCTTAAATCTGCTGGCGGTGTCAAATTGGATGAACCTGCCATTGACTTGGCCGTTGCGGTTT
CCATTGCTTCGAGTTATAAAGACAAGCCAACTAATCCTCAGGAATGTTTTGTAGGAGAGTTAGGCTTGACGGGAGAAATT
CGGCGCGTGAATCGTATTGAGCAGCGCATCAATGAAGCTGCTAAACTGGGTTTTACTAAGATTTATGTACCCAAGAATTC
CTTGACAGGAATCACTCCGCCCAAGGAAATTCAGGTCATTGGCGTAACAACGATTCAGGAAGTTTTGAAAAAGGTCTTTG
CATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radA | Streptococcus mitis NCTC 12261 |
98.896 |
99.78 |
0.987 |
| radA | Streptococcus mitis SK321 |
98.896 |
99.78 |
0.987 |
| radA | Streptococcus pneumoniae Rx1 |
98.896 |
99.78 |
0.987 |
| radA | Streptococcus pneumoniae D39 |
98.896 |
99.78 |
0.987 |
| radA | Streptococcus pneumoniae R6 |
98.896 |
99.78 |
0.987 |
| radA | Streptococcus pneumoniae TIGR4 |
98.896 |
99.78 |
0.987 |
| radA | Bacillus subtilis subsp. subtilis str. 168 |
63.135 |
99.78 |
0.63 |