Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ACAM22_RS08270 Genome accession   NZ_AP028929
Coordinates   1801131..1802168 (-) Length   345 a.a.
NCBI ID   WP_000727281.1    Uniprot ID   F9HAB0
Organism   Streptococcus sp. SN-1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1796131..1807168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS08245 (MASAN616_16010) endA 1797400..1798224 (-) 825 WP_153226562.1 DNA-entry nuclease EndA Machinery gene
  ACAM22_RS08250 (MASAN616_16020) - 1798263..1798451 (-) 189 WP_025171934.1 DNA-directed RNA polymerase subunit beta -
  ACAM22_RS08255 (MASAN616_16030) murA 1798444..1799727 (-) 1284 WP_000411904.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  ACAM22_RS08260 - 1799739..1800781 (-) 1043 Protein_1614 acyltransferase family protein -
  ACAM22_RS08265 (MASAN616_16060) - 1800843..1801073 (-) 231 WP_063612229.1 DUF1146 family protein -
  ACAM22_RS08270 (MASAN616_16070) sepM 1801131..1802168 (-) 1038 WP_000727281.1 SepM family pheromone-processing serine protease Regulator
  ACAM22_RS08275 (MASAN616_16080) coaD 1802152..1802640 (-) 489 WP_261052399.1 pantetheine-phosphate adenylyltransferase -
  ACAM22_RS08280 (MASAN616_16090) rsmD 1802630..1803169 (-) 540 WP_004248990.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ACAM22_RS08285 (MASAN616_16100) asnA 1803234..1804226 (-) 993 WP_000748005.1 aspartate--ammonia ligase -
  ACAM22_RS08290 (MASAN616_16110) - 1804338..1805021 (-) 684 WP_261052387.1 Bax inhibitor-1/YccA family protein -
  ACAM22_RS08295 (MASAN616_16120) - 1805076..1805816 (-) 741 WP_261052384.1 RNA methyltransferase -
  ACAM22_RS08300 (MASAN616_16130) - 1805850..1806128 (+) 279 WP_033684743.1 acylphosphatase -
  ACAM22_RS08305 (MASAN616_16140) yidC 1806207..1807133 (+) 927 WP_369607023.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37553.57 Da        Isoelectric Point: 4.8665

>NTDB_id=107351 ACAM22_RS08270 WP_000727281.1 1801131..1802168(-) (sepM) [Streptococcus sp. SN-1]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVNSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASAREGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=107351 ACAM22_RS08270 WP_000727281.1 1801131..1802168(-) (sepM) [Streptococcus sp. SN-1]
ATGAAAAAAAAGATTAGATGGCCCTTATATGTCATTGCGGCCTTGATTGTGACTTTCTTGGCGTTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTCCAGCACGCTACTTTAGCCCATATGATTTATGCTTGGTTGACGCCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGCTCTTCCGATGTTGAATTTATGCGAATTAATCAATTCTACATGCAGAC
ATCGCAAAATATGGCCAAGTATCAAGGGCTAAAAACAGCTGGTAAGGATATTGAACTAAAATATCTTGGGGTTTATGTTT
TGACTGTGACAGATAATTCGACCTTTAAAGGGATTCTCAACATCTCTGATACGGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAATTCTCAAAAACTAGGGGATTCTGTCAAGGTAACTTATGAAGAGGATGG
GCAAACCAAGTCTGCGGAAGGAAAGATTATCACCTTGGAAAATGGCAAAAATGGGATTGGAATCGGCTTGATTGACCGTA
CAGAAGTAACAAGTGATGTCCCAATTCGCTTTTCGACGGCTGGTATTGGCGGTCCAAGTGCAGGACTCATGTTTAGTCTG
GCTATCTATACCCAAATAGCTGACCCTGGCCTTCGTAATGGCCGTATCGTTGCCGGTACAGGAACCATTGACCGCGATGG
GAATGTGGGGGACATTGGAGGTATTGATAAGAAAGTCGTAGCTTCGGCTAGAGAAGGTGCCGCGATTTTCTTTGCCCCAG
ATAATCCTGTTAGCGAAGAAGAACAAAAAGCGCATCCGGATGCGAAAAACAACTACCAAACAGCCCTAGAAGCAGCCAAA
ACAATCAAGACAGATATGAAAATCGTGCCAGTTAAAACCCTACAAGATGCAATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9HAB0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591


Multiple sequence alignment