Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   ACI3EJ_RS06520 Genome accession   NZ_CP173417
Coordinates   1404892..1406163 (-) Length   423 a.a.
NCBI ID   WP_382385041.1    Uniprot ID   -
Organism   Ligilactobacillus acidipiscis strain YHS1A     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1399892..1411163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI3EJ_RS06515 (ACI3EJ_06520) - 1403140..1404852 (-) 1713 WP_405075737.1 proline--tRNA ligase -
  ACI3EJ_RS06520 (ACI3EJ_06525) eeP 1404892..1406163 (-) 1272 WP_382385041.1 RIP metalloprotease RseP Regulator
  ACI3EJ_RS06525 (ACI3EJ_06530) - 1406200..1406991 (-) 792 WP_333589064.1 phosphatidate cytidylyltransferase -
  ACI3EJ_RS06530 (ACI3EJ_06535) - 1406988..1407788 (-) 801 WP_405075738.1 isoprenyl transferase -
  ACI3EJ_RS06535 (ACI3EJ_06540) frr 1407925..1408488 (-) 564 WP_010496191.1 ribosome recycling factor -
  ACI3EJ_RS06540 (ACI3EJ_06545) pyrH 1408492..1409211 (-) 720 WP_405075739.1 UMP kinase -
  ACI3EJ_RS06545 (ACI3EJ_06550) rplS 1409423..1409779 (-) 357 WP_270333194.1 50S ribosomal protein L19 -
  ACI3EJ_RS06550 (ACI3EJ_06555) trmD 1409928..1410662 (-) 735 WP_333589066.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 46297.81 Da        Isoelectric Point: 6.7709

>NTDB_id=1072162 ACI3EJ_RS06520 WP_382385041.1 1404892..1406163(-) (eeP) [Ligilactobacillus acidipiscis strain YHS1A]
MFITIIAFIIVFGIIVTSHEFGHFIVAKESGILVREFSIGMGPKLFATHKNGTTYTIRILPLGGYVRMAGLEDDEDTLQK
GMPVNLILDQDEEVEKINTSHKVSLLNGLPIEVTEWDLIDDLYIEGYENGDEEKLRRFNVKPNAMIIETDGTEVQIAPRN
VQYQSASLIRRILTNIAGPVNNFLLAILAFILIAGIQGGSVTTINTVGAVQENSVAQKAGLKKGDKIVAVEGKKTASWDS
LSTAIGSRAGKKTELTINRDNKKQQVTLTPKSQNSGGQKVGMIGIQAGQKVDHSFGGIITYGFTQTYSVMKAVWDALVNM
FHGFSLNDLGGPVAMYSFTQQATKYGLISVINLLAFLSINLGIVNLLPIPALDGGKLLLNIIEAIRGKPLDPSKETLITL
IGFGFMMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=1072162 ACI3EJ_RS06520 WP_382385041.1 1404892..1406163(-) (eeP) [Ligilactobacillus acidipiscis strain YHS1A]
ATGTTCATTACGATCATCGCTTTTATAATTGTTTTTGGGATCATTGTGACTTCCCATGAATTTGGACATTTTATAGTTGC
AAAAGAATCTGGTATTTTAGTCCGTGAATTTTCTATTGGCATGGGTCCCAAGTTATTTGCTACTCATAAAAATGGAACGA
CCTATACGATCAGGATCTTGCCTTTGGGTGGTTATGTCCGCATGGCCGGTCTAGAAGATGATGAGGATACCTTGCAAAAA
GGGATGCCTGTTAATTTGATCTTAGATCAAGATGAAGAGGTTGAAAAAATTAATACTAGCCATAAAGTCAGTTTATTGAA
CGGTTTGCCGATTGAAGTGACTGAATGGGACCTAATTGATGATTTATATATCGAAGGATACGAAAATGGTGATGAAGAGA
AGCTGCGTCGCTTCAATGTTAAGCCTAACGCTATGATCATTGAAACAGATGGCACGGAAGTACAAATTGCTCCACGTAAT
GTTCAGTATCAATCAGCAAGTTTGATCAGGAGGATCCTAACAAATATTGCTGGTCCAGTGAATAACTTTCTTTTAGCGAT
CTTGGCCTTTATTTTGATCGCTGGCATTCAAGGTGGTTCTGTGACAACGATCAATACAGTTGGGGCTGTGCAAGAAAACT
CTGTGGCTCAAAAAGCAGGCCTAAAAAAAGGTGATAAGATCGTTGCCGTTGAAGGTAAAAAAACGGCTTCTTGGGATTCT
TTGTCTACTGCTATTGGAAGTAGAGCAGGTAAGAAAACAGAATTGACCATAAATCGTGATAATAAGAAACAGCAAGTTAC
TTTGACGCCTAAATCACAAAATTCTGGTGGTCAAAAAGTAGGAATGATCGGGATCCAAGCCGGTCAAAAAGTTGATCATT
CATTCGGGGGTATCATTACGTACGGTTTCACGCAGACATACTCTGTGATGAAAGCCGTTTGGGATGCGCTGGTCAATATG
TTCCACGGTTTTAGTCTGAATGATTTGGGTGGGCCAGTCGCAATGTACTCGTTCACTCAACAAGCAACTAAATATGGGCT
TATCAGTGTTATCAATCTGCTGGCCTTTTTATCGATCAATTTAGGGATCGTAAATTTATTGCCGATCCCAGCGTTAGATG
GTGGTAAACTATTACTGAATATTATTGAAGCAATTCGCGGTAAACCACTTGATCCAAGTAAAGAAACCTTGATCACATTG
ATTGGTTTTGGGTTTATGATGCTTTTAATGATATTAGTCACTTGGAATGATATTCAACGATATTTTTTCTAG

Domains


Predicted by InterproScan.

(207-259)

(7-409)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

47.897

100

0.485

  eeP Streptococcus thermophilus LMG 18311

47.897

100

0.485


Multiple sequence alignment