Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   ACI2O8_RS18710 Genome accession   NZ_CP173415
Coordinates   3585635..3586792 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis strain FJYA24     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3580635..3591792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI2O8_RS18680 (ACI2O8_18680) yvyF 3580888..3581307 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  ACI2O8_RS18685 (ACI2O8_18685) comFC 3581381..3582103 (-) 723 WP_029725992.1 comF operon protein ComFC Machinery gene
  ACI2O8_RS18690 (ACI2O8_18690) comFB 3582067..3582363 (-) 297 WP_015483764.1 late competence protein ComFB -
  ACI2O8_RS18695 (ACI2O8_18695) comFA 3582423..3583814 (-) 1392 WP_029725993.1 ATP-dependent helicase ComFA Machinery gene
  ACI2O8_RS18700 (ACI2O8_18700) fakBA 3583920..3584765 (-) 846 WP_003227986.1 DegV family protein -
  ACI2O8_RS18705 (ACI2O8_18705) degU 3584863..3585552 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  ACI2O8_RS18710 (ACI2O8_18710) degS 3585635..3586792 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  ACI2O8_RS18715 (ACI2O8_18715) yvyE 3587009..3587662 (+) 654 WP_003227979.1 YigZ family protein -
  ACI2O8_RS18720 (ACI2O8_18720) tagV 3587662..3588837 (+) 1176 WP_003227977.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  ACI2O8_RS18725 (ACI2O8_18725) tagO 3588910..3589986 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  ACI2O8_RS18730 (ACI2O8_18730) tuaH 3590131..3591324 (-) 1194 WP_072692828.1 teichuronic acid biosynthesis protein TuaH -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=1072132 ACI2O8_RS18710 WP_003227983.1 3585635..3586792(-) (degS) [Bacillus subtilis strain FJYA24]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=1072132 ACI2O8_RS18710 WP_003227983.1 3585635..3586792(-) (degS) [Bacillus subtilis strain FJYA24]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment