Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   ACI2O8_RS06600 Genome accession   NZ_CP173415
Coordinates   1256686..1257837 (+) Length   383 a.a.
NCBI ID   WP_088467623.1    Uniprot ID   -
Organism   Bacillus subtilis strain FJYA24     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1251686..1262837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI2O8_RS06565 (ACI2O8_06565) yjbB 1252358..1253575 (+) 1218 WP_080348083.1 MFS transporter -
  ACI2O8_RS06570 (ACI2O8_06570) yjbC 1253739..1254317 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  ACI2O8_RS06575 (ACI2O8_06575) spx 1254498..1254893 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  ACI2O8_RS06580 (ACI2O8_06580) yjbE 1254936..1255592 (-) 657 WP_003232944.1 TerC family protein -
  ACI2O8_RS06585 (ACI2O8_06585) - 1255762..1255902 (+) 141 WP_119122854.1 hypothetical protein -
  ACI2O8_RS06590 (ACI2O8_06590) mecA 1255869..1256525 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  ACI2O8_RS06595 (ACI2O8_06595) - 1256520..1256642 (-) 123 WP_122060507.1 hypothetical protein -
  ACI2O8_RS06600 (ACI2O8_06600) coiA 1256686..1257837 (+) 1152 WP_088467623.1 competence protein CoiA Machinery gene
  ACI2O8_RS06605 (ACI2O8_06605) pepF 1258067..1259896 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  ACI2O8_RS06610 (ACI2O8_06610) - 1259934..1260101 (-) 168 WP_003244944.1 hypothetical protein -
  ACI2O8_RS06615 (ACI2O8_06615) spxH 1260416..1261315 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  ACI2O8_RS06620 (ACI2O8_06620) bhbI 1261312..1261710 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  ACI2O8_RS06625 (ACI2O8_06625) cwlQ 1261962..1262696 (-) 735 WP_250615112.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44867.87 Da        Isoelectric Point: 9.8768

>NTDB_id=1072088 ACI2O8_RS06600 WP_088467623.1 1256686..1257837(+) (coiA) [Bacillus subtilis strain FJYA24]
MFSAVTEDGQMFHLLGAQQNQKLKQRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCANIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRQMFYEKRQTSFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=1072088 ACI2O8_RS06600 WP_088467623.1 1256686..1257837(+) (coiA) [Bacillus subtilis strain FJYA24]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCAGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAATCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCAATATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGTGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCTAAGGAAACAAATCGCCTTAGGCAGATGTTTTATGAGAAGCGGCAGACATCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

97.587

97.389

0.95


Multiple sequence alignment