Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | ACI3L8_RS08895 | Genome accession | NZ_CP173391 |
| Coordinates | 1952348..1952863 (+) | Length | 171 a.a. |
| NCBI ID | WP_045401529.1 | Uniprot ID | - |
| Organism | Vibrio campbellii strain LB3 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1947348..1957863
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI3L8_RS08875 (ACI3L8_08875) | - | 1947451..1950018 (-) | 2568 | WP_404971352.1 | penicillin-binding protein 1A | - |
| ACI3L8_RS08880 (ACI3L8_08880) | pilM | 1950197..1951213 (+) | 1017 | WP_005432712.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| ACI3L8_RS08885 (ACI3L8_08885) | pilN | 1951197..1951772 (+) | 576 | WP_005432710.1 | PilN domain-containing protein | Machinery gene |
| ACI3L8_RS08890 (ACI3L8_08890) | pilO | 1951765..1952358 (+) | 594 | WP_005432718.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACI3L8_RS08895 (ACI3L8_08895) | pilP | 1952348..1952863 (+) | 516 | WP_045401529.1 | pilus assembly protein PilP | Machinery gene |
| ACI3L8_RS08900 (ACI3L8_08900) | pilQ | 1952898..1954646 (+) | 1749 | WP_045369316.1 | type IV pilus secretin PilQ | Machinery gene |
| ACI3L8_RS08905 (ACI3L8_08905) | aroK | 1954835..1955353 (+) | 519 | WP_010443904.1 | shikimate kinase AroK | - |
| ACI3L8_RS08910 (ACI3L8_08910) | aroB | 1955385..1956485 (+) | 1101 | WP_045380637.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19196.27 Da Isoelectric Point: 10.0349
>NTDB_id=1072018 ACI3L8_RS08895 WP_045401529.1 1952348..1952863(+) (pilP) [Vibrio campbellii strain LB3]
MRNKSLLMVCMVSLLSGCQANDESLTDFIRDVENQARRDVAKLQPTEEYVVVSYEPEILRAPFELPKEATIATQPVARQD
CWQPPSRKRTGKLERFPLNQLRLKGVMGMGSSVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVSHSYLLINETLPDGLGC
WQKRKVKLALR
MRNKSLLMVCMVSLLSGCQANDESLTDFIRDVENQARRDVAKLQPTEEYVVVSYEPEILRAPFELPKEATIATQPVARQD
CWQPPSRKRTGKLERFPLNQLRLKGVMGMGSSVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVSHSYLLINETLPDGLGC
WQKRKVKLALR
Nucleotide
Download Length: 516 bp
>NTDB_id=1072018 ACI3L8_RS08895 WP_045401529.1 1952348..1952863(+) (pilP) [Vibrio campbellii strain LB3]
ATGCGAAATAAATCTTTGCTGATGGTTTGTATGGTGAGTCTGCTGAGTGGTTGCCAAGCCAATGATGAGTCACTGACCGA
CTTTATTCGCGATGTAGAAAACCAAGCACGCCGTGATGTCGCCAAACTCCAGCCGACTGAAGAATATGTAGTGGTGAGTT
ACGAGCCTGAAATTTTGCGTGCTCCTTTTGAACTGCCAAAAGAGGCCACCATCGCAACTCAACCTGTTGCGAGGCAAGAC
TGTTGGCAACCGCCGTCAAGAAAGCGCACTGGCAAACTGGAACGTTTCCCACTTAACCAACTTCGCCTTAAGGGTGTGAT
GGGAATGGGCAGCAGCGTCTCGGGTTTGGTTCAAGCACCGAATGGCACAGTTTACAAAGTGAAGCCAGGTCAATACCTCG
GACGTAACAATGGCAAGGTAACCCACGTATCCCACAGCTATTTATTGATTAATGAAACCTTGCCAGACGGTTTAGGTTGT
TGGCAAAAGCGCAAAGTGAAGTTGGCGTTGAGATAG
ATGCGAAATAAATCTTTGCTGATGGTTTGTATGGTGAGTCTGCTGAGTGGTTGCCAAGCCAATGATGAGTCACTGACCGA
CTTTATTCGCGATGTAGAAAACCAAGCACGCCGTGATGTCGCCAAACTCCAGCCGACTGAAGAATATGTAGTGGTGAGTT
ACGAGCCTGAAATTTTGCGTGCTCCTTTTGAACTGCCAAAAGAGGCCACCATCGCAACTCAACCTGTTGCGAGGCAAGAC
TGTTGGCAACCGCCGTCAAGAAAGCGCACTGGCAAACTGGAACGTTTCCCACTTAACCAACTTCGCCTTAAGGGTGTGAT
GGGAATGGGCAGCAGCGTCTCGGGTTTGGTTCAAGCACCGAATGGCACAGTTTACAAAGTGAAGCCAGGTCAATACCTCG
GACGTAACAATGGCAAGGTAACCCACGTATCCCACAGCTATTTATTGATTAATGAAACCTTGCCAGACGGTTTAGGTTGT
TGGCAAAAGCGCAAAGTGAAGTTGGCGTTGAGATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
98.83 |
100 |
0.988 |
| pilP | Vibrio cholerae strain A1552 |
56.977 |
100 |
0.573 |