Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   ACIQTD_RS09610 Genome accession   NZ_CP173185
Coordinates   1997024..1997725 (-) Length   233 a.a.
NCBI ID   WP_004255173.1    Uniprot ID   S6FFV7
Organism   Lactococcus lactis subsp. lactis strain MGEL24009     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1992024..2002725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIQTD_RS09590 - 1992134..1993351 (-) 1218 WP_270249750.1 cysteine desulfurase -
  ACIQTD_RS09595 sufD 1993351..1994607 (-) 1257 WP_270249751.1 Fe-S cluster assembly protein SufD -
  ACIQTD_RS09600 sufC 1994745..1995515 (-) 771 WP_004255181.1 Fe-S cluster assembly ATPase SufC -
  ACIQTD_RS09605 - 1995690..1997021 (-) 1332 WP_021722251.1 glycosyltransferase family 4 protein -
  ACIQTD_RS09610 mecA 1997024..1997725 (-) 702 WP_004255173.1 adaptor protein MecA Regulator
  ACIQTD_RS09615 - 1997855..1998589 (-) 735 WP_004255171.1 amino acid ABC transporter ATP-binding protein -
  ACIQTD_RS09620 - 1998589..1999275 (-) 687 WP_004255158.1 amino acid ABC transporter permease -
  ACIQTD_RS09625 - 1999422..2000330 (-) 909 WP_270249753.1 diacylglycerol kinase family protein -

Sequence


Protein


Download         Length: 233 a.a.        Molecular weight: 27077.46 Da        Isoelectric Point: 4.1246

>NTDB_id=1070508 ACIQTD_RS09610 WP_004255173.1 1997024..1997725(-) (mecA) [Lactococcus lactis subsp. lactis strain MGEL24009]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=1070508 ACIQTD_RS09610 WP_004255173.1 1997024..1997725(-) (mecA) [Lactococcus lactis subsp. lactis strain MGEL24009]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATGTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTTGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATCGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB S6FFV7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.571

100

0.996

  mecA Lactococcus lactis subsp. cremoris KW2

96.996

100

0.97


Multiple sequence alignment