Detailed information NTG1070144

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: ACIGXT_RS16925
• Genome accession: NZ_CP173038
• Coordinates: 3428593..3429282 (-)
• Length: 229 a.a.
• NCBI ID: WP_196616643.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Shannan.BV80-12
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3423593..3434282

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIGXT_RS16890 (ACIGXT_16890)	fliW	3423684..3424115 (-)	432	WP_060657507.1	flagellar assembly protein FliW	-
ACIGXT_RS16895 (ACIGXT_16895)	-	3424145..3424714 (-)	570	WP_003151397.1	DUF6470 family protein	-
ACIGXT_RS16900 (ACIGXT_16900)	flgL	3424805..3425722 (-)	918	WP_060657505.1	flagellar hook-associated protein FlgL	-
ACIGXT_RS16905 (ACIGXT_16905)	flgK	3425734..3427251 (-)	1518	WP_003151395.1	flagellar hook-associated protein FlgK	-
ACIGXT_RS16910 (ACIGXT_16910)	-	3427267..3427749 (-)	483	WP_003151394.1	flagellar protein FlgN	-
ACIGXT_RS16915 (ACIGXT_16915)	flgM	3427764..3428030 (-)	267	WP_003151393.1	flagellar biosynthesis anti-sigma factor FlgM	-
ACIGXT_RS16920 (ACIGXT_16920)	-	3428100..3428519 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
ACIGXT_RS16925 (ACIGXT_16925)	comFC	3428593..3429282 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
ACIGXT_RS16930 (ACIGXT_16930)	-	3429288..3429572 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
ACIGXT_RS16935 (ACIGXT_16935)	comFA	3429630..3431015 (-)	1386	WP_044052858.1	DEAD/DEAH box helicase	Machinery gene
ACIGXT_RS16940 (ACIGXT_16940)	-	3431123..3431971 (-)	849	WP_044052857.1	DegV family protein	-
ACIGXT_RS16945 (ACIGXT_16945)	degU	3432069..3432758 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACIGXT_RS16950 (ACIGXT_16950)	degS	3432835..3433998 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 25259.95 Da
• Isoelectric Point: 8.4880

>NTDB_id=1070144 ACIGXT_RS16925 WP_196616643.1 3428593..3429282(-) (comFC) [Bacillus velezensis strain Shannan.BV80-12]
MNCLLCDSPISSSLTWRSLFSLAPEQEVCTICSSRFEKIEGPVCSICGRPQESNEKCADCAARESKTEKRFLLRQNRSVY
LYNDAMKDSLARFKFRGDAKIIQAFGRDFAAGFKAAYPSNTHTLIPIPLSGERLAERGFNQSELLASLLGMPVIFPLIRL
NNEKQSKKSKTERLSAEKKFSAAENSAEGMNVILIDDIYTTGATLHQAAEVLLTAGKASSVSSFTLIRS

Nucleotide

• Length: 690 bp

>NTDB_id=1070144 ACIGXT_RS16925 WP_196616643.1 3428593..3429282(-) (comFC) [Bacillus velezensis strain Shannan.BV80-12]
CTGAATTGTTTATTGTGTGACTCACCAATTTCAAGTTCATTGACTTGGAGATCTCTGTTTTCTCTGGCGCCCGAGCAAGA
GGTATGCACCATATGCAGCAGCCGATTCGAAAAAATTGAGGGCCCCGTATGCAGTATATGCGGGAGGCCTCAGGAGTCAA
ATGAAAAATGCGCTGATTGTGCGGCCCGGGAATCAAAAACGGAAAAGCGCTTTTTGCTGCGGCAAAACCGTTCGGTATAT
TTGTATAATGATGCGATGAAGGACTCATTAGCCCGGTTTAAATTCAGGGGTGATGCGAAAATCATTCAAGCATTTGGACG
TGACTTTGCTGCCGGCTTTAAAGCGGCATATCCATCAAATACACATACTCTCATCCCTATTCCGCTGAGCGGCGAACGGC
TGGCGGAACGCGGTTTCAATCAATCCGAGCTGCTGGCCTCTCTGCTCGGAATGCCCGTCATTTTCCCCCTCATCCGACTG
AACAATGAAAAACAATCCAAAAAGAGCAAAACAGAAAGGCTGTCCGCAGAAAAAAAGTTTTCAGCAGCCGAAAACTCGGC
CGAAGGTATGAACGTCATCTTAATAGACGATATTTATACGACGGGCGCCACACTGCATCAAGCCGCCGAAGTCCTGCTGA
CAGCGGGTAAAGCGTCATCGGTCTCCTCTTTTACTTTAATCAGGAGCTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (2-61)

• Phosphoribosyl transferase domain (Pribosyltran) (144-227)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	60.793	99.127	0.603