Detailed information NTG1069996

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACIHQS_RS08335
• Genome accession: NZ_CP173025
• Coordinates: 1749584..1750321 (-)
• Length: 245 a.a.
• NCBI ID: WP_404231590.1
• Uniprot ID: -
• Organism: Acinetobacter venetianus strain AVYS1
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1744584..1755321

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIHQS_RS08305 (ACIHQS_08305)	-	1745019..1745459 (-)	441	WP_404231585.1	SRPBCC family protein	-
ACIHQS_RS08310 (ACIHQS_08310)	tadA	1745526..1746035 (-)	510	WP_061524677.1	tRNA adenosine(34) deaminase TadA	-
ACIHQS_RS08315 (ACIHQS_08315)	-	1746042..1747163 (-)	1122	WP_007481840.1	enoyl-CoA hydratase/isomerase family protein	-
ACIHQS_RS08320 (ACIHQS_08320)	ung	1747163..1747876 (-)	714	WP_404231588.1	uracil-DNA glycosylase	-
ACIHQS_RS08325 (ACIHQS_08325)	-	1747921..1748517 (-)	597	WP_061518371.1	6-carboxytetrahydropterin synthase	-
ACIHQS_RS08330 (ACIHQS_08330)	gspK	1748625..1749581 (-)	957	WP_404231678.1	type II secretion system minor pseudopilin GspK	-
ACIHQS_RS08335 (ACIHQS_08335)	xcpW	1749584..1750321 (-)	738	WP_404231590.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACIHQS_RS08340 (ACIHQS_08340)	xcpV	1750321..1750827 (-)	507	WP_081104367.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACIHQS_RS08345 (ACIHQS_08345)	-	1750817..1751392 (-)	576	WP_404231680.1	type II secretion system protein	-
ACIHQS_RS08350 (ACIHQS_08350)	-	1751699..1752307 (-)	609	WP_017196661.1	TetR/AcrR family transcriptional regulator	-
ACIHQS_RS08355 (ACIHQS_08355)	-	1752348..1753121 (-)	774	WP_404231593.1	TatD family hydrolase	-
ACIHQS_RS08360 (ACIHQS_08360)	-	1753147..1753491 (-)	345	WP_404231595.1	PilZ domain-containing protein	-
ACIHQS_RS08365 (ACIHQS_08365)	-	1753804..1754787 (-)	984	WP_404231597.1	DNA polymerase III subunit delta'	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 27937.10 Da
• Isoelectric Point: 9.1392

>NTDB_id=1069996 ACIHQS_RS08335 WP_404231590.1 1749584..1750321(-) (xcpW) [Acinetobacter venetianus strain AVYS1]
MNNKNVFVISSVSNAQPKFDLVNSNTRSLVPCFAVRSSIARQKSVLGFTLVELLVAIAIFAVLSMMGWKVFDYLLKVKDR
NAEHETHLFELQDAYQQILRDSLQIIPLTANDGRQIQAALVLNDRTFMFSKAGVSDPLKQGLSPYERIEYRYDSAQKKVY
RLKYSNLNIPNRIQPVSSTLIENVDQFKLTVLNPQELTQWPENINDPNNVAELKKLPLGLKIQLTVAGTDYEWIYSLLRT
NQDGQ

Nucleotide

• Length: 738 bp

>NTDB_id=1069996 ACIHQS_RS08335 WP_404231590.1 1749584..1750321(-) (xcpW) [Acinetobacter venetianus strain AVYS1]
ATGAATAATAAAAATGTGTTTGTAATTTCATCAGTTTCTAATGCTCAACCAAAGTTTGACTTGGTTAATTCAAACACTCG
AAGCTTAGTTCCCTGCTTTGCAGTAAGGTCGAGCATTGCTCGTCAGAAATCAGTTTTAGGATTTACCTTAGTGGAGCTGT
TGGTTGCGATCGCAATTTTTGCTGTGCTTTCAATGATGGGTTGGAAGGTTTTTGATTATCTGCTTAAAGTCAAAGATCGT
AATGCTGAACATGAGACACATTTGTTTGAATTACAAGACGCGTATCAGCAAATTTTACGAGATAGTTTGCAAATTATTCC
TTTAACAGCAAATGATGGGAGGCAAATACAGGCTGCTTTGGTGCTCAATGATAGAACTTTTATGTTTAGTAAGGCAGGTG
TCTCAGATCCTCTGAAACAAGGTTTGTCACCTTATGAGCGAATAGAGTATCGTTATGATTCGGCACAGAAAAAAGTATAT
AGACTTAAATATTCAAACTTAAATATCCCAAATCGTATTCAGCCTGTTTCAAGTACTTTGATTGAAAATGTAGATCAATT
TAAATTAACTGTTTTGAATCCTCAAGAATTAACCCAGTGGCCAGAAAATATCAATGATCCAAATAATGTGGCCGAACTAA
AAAAGCTACCATTAGGGTTGAAAATCCAGCTTACGGTAGCAGGAACAGATTATGAATGGATTTATAGTCTGCTTCGTACC
AATCAGGATGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (46-66)

• Type II secretion system (T2SS), protein J (T2SSJ) (100-229)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	67.411	91.429	0.616