Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   ACIHQS_RS01865 Genome accession   NZ_CP173025
Coordinates   381896..382780 (+) Length   294 a.a.
NCBI ID   WP_023013224.1    Uniprot ID   U7H160
Organism   Acinetobacter venetianus strain AVYS1     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 376896..387780
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACIHQS_RS01835 (ACIHQS_01835) - 376969..377478 (-) 510 WP_404230042.1 dihydrofolate reductase -
  ACIHQS_RS01840 (ACIHQS_01840) thyA 377499..378341 (-) 843 WP_004876734.1 thymidylate synthase -
  ACIHQS_RS01845 (ACIHQS_01845) - 378514..379338 (+) 825 WP_404230045.1 YwqG family protein -
  ACIHQS_RS01850 (ACIHQS_01850) - 379399..379974 (-) 576 WP_004876738.1 xanthine phosphoribosyltransferase -
  ACIHQS_RS01855 (ACIHQS_01855) - 380063..380779 (-) 717 WP_004876740.1 DUF3108 domain-containing protein -
  ACIHQS_RS01860 (ACIHQS_01860) - 380975..381652 (-) 678 WP_023013223.1 hypothetical protein -
  ACIHQS_RS01865 (ACIHQS_01865) tonB2 381896..382780 (+) 885 WP_023013224.1 energy transducer TonB Machinery gene
  ACIHQS_RS01870 (ACIHQS_01870) fhuE 383068..385227 (+) 2160 WP_404230049.1 ferric-rhodotorulic acid/ferric-coprogen receptor FhuE -
  ACIHQS_RS01875 (ACIHQS_01875) - 385311..385598 (-) 288 WP_004876744.1 antibiotic biosynthesis monooxygenase -
  ACIHQS_RS01880 (ACIHQS_01880) ybeY 385609..386094 (-) 486 WP_404230052.1 rRNA maturation RNase YbeY -
  ACIHQS_RS01885 (ACIHQS_01885) - 386167..387249 (-) 1083 WP_004876747.1 PhoH family protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33407.86 Da        Isoelectric Point: 7.0806

>NTDB_id=1069989 ACIHQS_RS01865 WP_023013224.1 381896..382780(+) (tonB2) [Acinetobacter venetianus strain AVYS1]
MWNKINFRSELSPHWWQDPIFVGAVTVAMLLHGAVLAIQFGMPSPSDTSTKEIAVTVRTSQDKVKDADFLAQADQKGSGD
FREAHRMSSDMPSPMQADATTGETELESLEKIQQKRELKFEEKVLMTVLSWQKQSEETERKKALDDLQSQFQAKAAMVAS
LEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDEAKQQRLAGEVRLMVILNAQGGIRAIRL
IESSGHSILDEAAKASVRRGAPFGHFDANMKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=1069989 ACIHQS_RS01865 WP_023013224.1 381896..382780(+) (tonB2) [Acinetobacter venetianus strain AVYS1]
ATGTGGAATAAAATAAATTTTCGTTCTGAACTATCTCCTCATTGGTGGCAAGATCCAATCTTTGTAGGAGCTGTTACGGT
TGCAATGCTGCTGCATGGAGCTGTGCTGGCGATTCAGTTTGGTATGCCATCGCCGTCTGATACCTCGACTAAAGAAATTG
CAGTCACCGTCCGTACAAGTCAAGACAAAGTGAAAGATGCTGATTTTCTTGCACAAGCCGATCAAAAAGGTTCGGGTGAT
TTCCGTGAAGCACATCGGATGTCGAGTGATATGCCTTCACCGATGCAAGCAGATGCGACTACAGGTGAGACTGAACTAGA
AAGTTTGGAAAAGATACAGCAGAAACGTGAATTAAAATTTGAAGAAAAAGTTTTAATGACTGTGCTCAGCTGGCAAAAGC
AGTCAGAAGAAACCGAACGTAAAAAAGCTTTGGATGATTTACAAAGCCAGTTTCAAGCAAAAGCTGCGATGGTCGCAAGT
TTAGAAGCACAGTATTTACAACGTCAGCAAAATTTTAGCCGTAAGCAACGCATTAAAACAGTGGATGGCATTCAGGCTAA
ACAAGATGCTTCAGCCGCTTATCTTGATAAATTTCGCCAAAAAGTAGAGCTATATGGTAACCGTTATTATCCAGATGAGG
CGAAACAGCAACGACTCGCTGGTGAAGTTCGTTTAATGGTGATTCTAAATGCGCAAGGTGGAATTCGAGCGATTCGCTTA
ATTGAAAGTTCGGGTCATTCTATTTTAGATGAAGCAGCTAAAGCTTCTGTTCGTCGTGGTGCACCGTTTGGACATTTTGA
TGCCAATATGAAAGACATTTCTGAATTGCGAATTATTCGTACATGGCGTTTTGATCCTGTTGATGCTGAATTTGAAGTAC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB U7H160

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.871

100

0.769

Multiple sequence alignment