Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ACG2K1_RS04430 Genome accession   NZ_CP173024
Coordinates   870592..871059 (-) Length   155 a.a.
NCBI ID   WP_395429589.1    Uniprot ID   -
Organism   Neisseria sp. 23W00296     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 865592..876059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG2K1_RS04405 (ACG2K1_04405) comE 866599..866925 (+) 327 WP_395429613.1 ComEA family DNA-binding protein Machinery gene
  ACG2K1_RS04410 (ACG2K1_04410) - 867043..867900 (-) 858 WP_395429578.1 EamA family transporter -
  ACG2K1_RS04415 (ACG2K1_04415) - 868020..868682 (-) 663 WP_395429579.1 NAD(P)H-dependent oxidoreductase -
  ACG2K1_RS04420 (ACG2K1_04420) - 868790..869305 (+) 516 WP_395429580.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACG2K1_RS04425 (ACG2K1_04425) - 869589..870404 (-) 816 WP_395429581.1 symmetrical bis(5'-nucleosyl)-tetraphosphatase -
  ACG2K1_RS04430 (ACG2K1_04430) recX 870592..871059 (-) 468 WP_395429589.1 recombination regulator RecX Regulator
  ACG2K1_RS04435 (ACG2K1_04435) - 871244..871960 (-) 717 WP_009426484.1 phosphoglycolate phosphatase -
  ACG2K1_RS04440 (ACG2K1_04440) - 872118..872822 (-) 705 WP_395429582.1 5'-methylthioadenosine/adenosylhomocysteine nucleosidase -
  ACG2K1_RS04445 (ACG2K1_04445) - 872819..873271 (-) 453 WP_009426487.1 S-ribosylhomocysteine lyase -
  ACG2K1_RS04450 (ACG2K1_04450) - 873406..874209 (-) 804 WP_009426489.1 RNA methyltransferase -
  ACG2K1_RS04455 (ACG2K1_04455) - 874474..875271 (+) 798 WP_009426491.1 inositol monophosphatase family protein -

Sequence

Protein


Download         Length: 155 a.a.        Molecular weight: 17971.13 Da        Isoelectric Point: 8.3917

>NTDB_id=1069951 ACG2K1_RS04430 WP_395429589.1 870592..871059(-) (recX) [Neisseria sp. 23W00296]
MKPQKSLRARALDILARSETGRAALKRKLAPYAQSEEELEAVLNEMAERGWQSDERYAEAYIHSKSQKHGSLRLRRDLEQ
QGIDRDTVRALLPDAEQELAAAVAAVQKKFKAPPQDYAEKQKQIRFLAYRGFDGDTVRRALRQAWSDWRDEWDDE

Nucleotide


Download         Length: 468 bp        

>NTDB_id=1069951 ACG2K1_RS04430 WP_395429589.1 870592..871059(-) (recX) [Neisseria sp. 23W00296]
ATGAAACCGCAAAAATCCCTGCGCGCCCGCGCCCTCGACATCCTCGCCCGCAGCGAAACCGGCCGCGCCGCCCTCAAACG
CAAACTCGCCCCGTATGCCCAAAGCGAAGAAGAGTTGGAGGCCGTCTTAAACGAAATGGCCGAACGCGGCTGGCAGTCGG
ACGAGCGTTACGCCGAAGCCTACATCCACAGCAAAAGCCAAAAACACGGCAGCCTGCGCCTGCGCCGCGACCTCGAACAG
CAGGGCATAGACCGCGACACCGTCCGCGCCCTCCTGCCCGACGCGGAACAGGAACTCGCCGCCGCCGTGGCCGCCGTGCA
GAAAAAATTCAAAGCCCCGCCGCAGGACTACGCGGAAAAACAAAAACAGATACGCTTTCTCGCCTACCGCGGCTTCGACG
GCGACACCGTCCGCCGCGCCCTGCGCCAAGCCTGGTCGGATTGGCGCGACGAATGGGACGACGAATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(34-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

68.212

97.419

0.665

Multiple sequence alignment