Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   ACF2JY_RS18590 Genome accession   NZ_CP172966
Coordinates   3589390..3589788 (+) Length   132 a.a.
NCBI ID   WP_015715226.1    Uniprot ID   A0AA96URL7
Organism   Bacillus subtilis strain cel     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3584390..3594788
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF2JY_RS18565 (ACF2JY_18565) hxlR 3585128..3585490 (-) 363 WP_003246265.1 transcriptional activator HxlR -
  ACF2JY_RS18570 (ACF2JY_18570) hxlA 3585719..3586351 (+) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  ACF2JY_RS18575 (ACF2JY_18575) hxlB 3586357..3586914 (+) 558 WP_003234605.1 6-phospho-3-hexuloisomerase -
  ACF2JY_RS18580 (ACF2JY_18580) tlpC 3587025..3588746 (+) 1722 WP_046380779.1 methyl-accepting chemotaxis protein TlpC -
  ACF2JY_RS18585 (ACF2JY_18585) nucA/comI 3588914..3589363 (+) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  ACF2JY_RS18590 (ACF2JY_18590) nin/comJ 3589390..3589788 (+) 399 WP_015715226.1 DNA-entry nuclease inhibitor Regulator
  ACF2JY_RS18595 (ACF2JY_18595) bglC 3589825..3591258 (-) 1434 WP_046380778.1 6-phospho-beta-glucosidase -
  ACF2JY_RS18600 (ACF2JY_18600) - 3591330..3592058 (-) 729 WP_046380777.1 AAA family ATPase -
  ACF2JY_RS18605 (ACF2JY_18605) - 3592077..3592418 (-) 342 WP_032724911.1 DUF3147 family protein -
  ACF2JY_RS18610 (ACF2JY_18610) - 3592406..3592828 (-) 423 WP_174616579.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACF2JY_RS18615 (ACF2JY_18615) yckD 3592956..3593288 (-) 333 WP_015252849.1 YckD family protein -
  ACF2JY_RS18620 (ACF2JY_18620) - 3593370..3593717 (-) 348 WP_082098065.1 RDD family protein -
  ACF2JY_RS18625 (ACF2JY_18625) - 3593724..3593919 (-) 196 Protein_3656 hypothetical protein -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14935.90 Da        Isoelectric Point: 4.8991

>NTDB_id=1069746 ACF2JY_RS18590 WP_015715226.1 3589390..3589788(+) (nin/comJ) [Bacillus subtilis strain cel]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1069746 ACF2JY_RS18590 WP_015715226.1 3589390..3589788(+) (nin/comJ) [Bacillus subtilis strain cel]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985


Multiple sequence alignment