Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   ACF2JY_RS18585 Genome accession   NZ_CP172966
Coordinates   3588914..3589363 (+) Length   149 a.a.
NCBI ID   WP_003234608.1    Uniprot ID   A0A8E0S750
Organism   Bacillus subtilis strain cel     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3583914..3594363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF2JY_RS18565 (ACF2JY_18565) hxlR 3585128..3585490 (-) 363 WP_003246265.1 transcriptional activator HxlR -
  ACF2JY_RS18570 (ACF2JY_18570) hxlA 3585719..3586351 (+) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  ACF2JY_RS18575 (ACF2JY_18575) hxlB 3586357..3586914 (+) 558 WP_003234605.1 6-phospho-3-hexuloisomerase -
  ACF2JY_RS18580 (ACF2JY_18580) tlpC 3587025..3588746 (+) 1722 WP_046380779.1 methyl-accepting chemotaxis protein TlpC -
  ACF2JY_RS18585 (ACF2JY_18585) nucA/comI 3588914..3589363 (+) 450 WP_003234608.1 DNA-entry nuclease Machinery gene
  ACF2JY_RS18590 (ACF2JY_18590) nin/comJ 3589390..3589788 (+) 399 WP_015715226.1 DNA-entry nuclease inhibitor Regulator
  ACF2JY_RS18595 (ACF2JY_18595) bglC 3589825..3591258 (-) 1434 WP_046380778.1 6-phospho-beta-glucosidase -
  ACF2JY_RS18600 (ACF2JY_18600) - 3591330..3592058 (-) 729 WP_046380777.1 AAA family ATPase -
  ACF2JY_RS18605 (ACF2JY_18605) - 3592077..3592418 (-) 342 WP_032724911.1 DUF3147 family protein -
  ACF2JY_RS18610 (ACF2JY_18610) - 3592406..3592828 (-) 423 WP_174616579.1 MarR family winged helix-turn-helix transcriptional regulator -
  ACF2JY_RS18615 (ACF2JY_18615) yckD 3592956..3593288 (-) 333 WP_015252849.1 YckD family protein -
  ACF2JY_RS18620 (ACF2JY_18620) - 3593370..3593717 (-) 348 WP_082098065.1 RDD family protein -
  ACF2JY_RS18625 (ACF2JY_18625) - 3593724..3593919 (-) 196 Protein_3656 hypothetical protein -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 16470.42 Da        Isoelectric Point: 4.5282

>NTDB_id=1069745 ACF2JY_RS18585 WP_003234608.1 3588914..3589363(+) (nucA/comI) [Bacillus subtilis strain cel]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSTDQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ

Nucleotide


Download         Length: 450 bp        

>NTDB_id=1069745 ACF2JY_RS18585 WP_003234608.1 3588914..3589363(+) (nucA/comI) [Bacillus subtilis strain cel]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGTCTGATAAA
AGGAGACTTTTTTTCAACTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGACACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(52-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

97.987

100

0.98

Multiple sequence alignment